DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0005952
GeneDepdc7
Synonyms
Desc.DEP domain containing 7
LocusNM_144804 chr2:104561944-104582958(-)
DB links


Entrez 211896
MGI 2139258
Ensembl ENSMUSG00000027173
Vega OTTMUSG00000014963
Featureprotein-coding
GO(BP)
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2005878
(v2.0)
Depdc7NM_144804211896
10.3784442.725154.647183.031167.3138.232411.56854121.893140.0199.61204
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0005952
(v1.0)
Depdc7211896
Maternal RNA0.97121
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005878
(v2.0)
Depdc7211896
716/3980.3336530/3980.296468/3981.0296383/3981.2705506/3982.3922213/3981.8732
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2005878
(v2.0)
Depdc7211896
406/1850.6184296/1850.559462/1851.9553347/1852.2234326/1852.84741367/1852.2799
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005878
(v2.0)
Depdc7211896
35.94839836.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2005878
(v2.0)
Depdc7211896
12.0266020.04
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005952
(v1.0)
Depdc7NM_144804211896
459.881106.699136.27116.2741.11371
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005952
(v1.0)
Depdc7NM_144804211896
2898.14555.894633.606640.6659.9162
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005952
(v1.0)
Depdc7NM_144804211896
480.8473.79548116.411
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005952
(v1.0)
Depdc7NM_144804211896
469.355105.62890.4398
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0005952
(v1.0)
Depdc7NM_144804211896
293.084322.563
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005952
(v1.0)
Depdc7NM_144804211896
481.1273.743599.1913
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005952
(v1.0)
Depdc7NM_144804211896
126.165112.26796.9681
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0005952
(v1.0)
Depdc7NM_144804211896
467.623490.647
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005952
(v1.0)
Depdc7NM_144804211896
266.934126.146
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005952
(v1.0)
Depdc7NM_144804211896
193.598239.519
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005952
(v1.0)
1424303_atMm.288805Depdc7NM_144804.1211896
2913.854119.9751261.55584.2357.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0005952
(v1.0)
A_52_P23379AV216087NM_144804211896
11P0.6320.136P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005952
(v1.0)
Depdc7211896
050060