DBTMEE:0006188
| Gene | Dnmt3a |
| Synonyms | |
| Description | DNA methyltransferase 3A |
| Locus | NM_007872 UCSC: chr12:3806980-3914443(+) OLP: chr12:3806980-3914443(+)
NM_001271753 UCSC: chr12:3807160-3914443(+) OLP: chr12:3807160-3914443(+)
NM_153743 UCSC: chr12:3891744-3914443(+) OLP: chr12:3891744-3914443(+)
|
| DB links |
Entrez 13435
MGI 1261827
Ensembl ENSMUSG00000020661
Vega OTTMUSG00000037610
|
| Feature | protein-coding |
| GO_BP |
-
 18 Terms
|
| GO_MF |
-
9 Terms
|
| GO_CC |
-
7 Terms
|
| KEGG |
-
2 Terms
|
| Ver2_FPKM |
see DBTMEE:2006117 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0006188
(v1.0) | Dnmt3a | NM_007872,NM_153743 | 13435
| 42.3829 | 50.037 | 7.67869 | 8.06948 | 2.79211 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0006188
(v1.0) | Dnmt3a | NM_007872,NM_153743 | 13435
| 44.3152 | 12.6696 | 54.5915 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0006188
(v1.0) | Dnmt3a | NM_007872,NM_153743 | 13435
| 43.2561 | 49.5346 | 66.0893 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0006188
(v1.0) | Dnmt3a | NM_007872,NM_153743 | 13435
| 44.341 | 12.496 | 72.4845 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0006188
(v1.0) | Dnmt3a | NM_007872,NM_153743 | 13435
| 7.10927 | 7.79141 | 8.42812 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0006188
(v1.0) | Dnmt3a | NM_007872,NM_153743 | 13435
| 49.1248 | 8.17217 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0006188
(v1.0) | Dnmt3a | NM_007872,NM_153743 | 13435
| 13.1932 | 17.1533 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0006188
(v1.0) | 1422 | C0207G10-3 | Mm.229338 | | | U013709 | NAP041210-1 | Dnmt3a; | | O88508 | U,F,2 | 2.1934 | 2.492 | 2.4798 | 2.4293 | 2.039 | 2.3639 | 2.1805 |
0006188
(v1.0) | 9810 | H3086G02-3 | | Dnmt3a | 13435
| U013709 | NAP092564-001 | Dnmt3a; | TC892740 | O88508 | U,F,2 | 3.1011 | 2.9522 | 2.993 | 3.0123 | 3.3268 | 3.1244 | 3.2072 |
0006188
(v1.0) | 11794 | H3123C02-3 | Mm.5001 | Dnmt3a | 13435
| U013709 | NAP092564-001 | Dnmt3a; | TC909399 | O88508 | U,F,2 | 2.6594 | 2.6295 | 2.4091 | 2.4799 | 2.1693 | 2.234 | 2.2775 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0006188
(v1.0) | 1423063_at | Mm.5001 | Dnmt3a | NM_007872.4,NM_153743.3 | 13435
| 77.7 | 123.975 | 81.05 | 81.5 | 90.325 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0006188
(v1.0) | A_52_P30497 | Dnmt3a | NM_007872 | 13435
| 1 | 1 | P | 1.091 | 0.558 | P |
0006188
(v1.0) | A_52_P76146 | Dnmt3a | NM_007872 | 13435
| 1 | 1 | P | 0.874 | 0.406 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0006188
(v1.0) | Dnmt3a | 13435
| 1 | 3 | 0 | 1 | 3 | 0 |
|
