DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006443
GeneE330017A01Rik
Synonyms
Desc.RIKEN cDNA E330017A01 gene
LocusNM_175011 chr16:58635375-58638516(-)
DB links


Entrez 224247
MGI 3045360
Ensembl ENSMUSG00000055789
Vega OTTMUSG00000036766
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006374
(v2.0)
E330017A01RikNM_175011224247
0191.31347.29319.516546.224970036.873610.21840
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006443
(v1.0)
E330017A01Rik224247
Maternal RNA0.99135
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006374
(v2.0)
E330017A01Rik224247
347/310-0.3489286/310-0.231611/310-1.145554/310-1.1751113/3100.5953796/3100.7592
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006374
(v2.0)
E330017A01Rik224247
223/183-0.2263168/183-0.23827/183-1.007335/183-1.034275/1830.7576470/1830.7582
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006374
(v2.0)
E330017A01Rik224247
50.56315591.93
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006374
(v2.0)
E330017A01Rik224247
30.59133392.7
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006443
(v1.0)
E330017A01RikNM_175011224247
198.8132.50027.062024.305830
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006443
(v1.0)
E330017A01RikNM_175011224247
281.35842.31239.938355.772750
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006443
(v1.0)
E330017A01RikNM_175011224247
207.874035.4584
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006443
(v1.0)
E330017A01RikNM_175011224247
202.90532.173827.2738
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006443
(v1.0)
E330017A01RikNM_175011224247
43.118834.412
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006443
(v1.0)
E330017A01RikNM_175011224247
207.995029.913
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006443
(v1.0)
E330017A01RikNM_175011224247
6.538334.157457.23302
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006443
(v1.0)
E330017A01RikNM_175011224247
5.674478.71852
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006443
(v1.0)
E330017A01RikNM_175011224247
83.6379.62137
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006443
(v1.0)
E330017A01RikNM_175011224247
1.323615.48
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006443
(v1.0)
9019H3075E03-3Mm.26145E330017A01224247
U037138NAP014366-001TC937632U,F3.12312.97442.4672.55962.81982.43892.6658
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006443
(v1.0)
A_51_P279955E330017A01RikNM_175011224247
11P0.9230.616P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0006443
(v1.0)
E330017A01Rik224247
111978817258