DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006557
GeneEfr3a
Synonyms
Desc.EFR3 homolog A (S. cerevisiae)
LocusNM_133766 chr15:65618603-65705374(+)
DB links


Entrez 76740
MGI 1923990
Ensembl ENSMUSG00000015002
Vega OTTMUSG00000036980
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006488
(v2.0)
Efr3aNM_13376676740
11.77177.9167814.323212.801913.42413.932443.002511.975611.26214.1718
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006557
(v1.0)
Efr3a76740
Minor ZGA0.9943
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006488
(v2.0)
Efr3a76740
735/4640.1505538/4640.0971187/4642.2604422/4641.1989/464-0.3212485/464-0.5341
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006488
(v2.0)
Efr3a76740
351/2030.2759253/2030.2005176/2033.3196372/2032.191211/203-2.051982/203-1.8878
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006488
(v2.0)
Efr3a76740
52.29099753.91
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006488
(v2.0)
Efr3a76740
21.60966533.25
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006557
(v1.0)
Efr3aNM_13376676740
8.227929.886769.528239.3085530.4161
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006557
(v1.0)
Efr3aFR068108,FR143270,FR273434,NM_13376676740
224.044168.804218.971340.267364.296
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006557
(v1.0)
Efr3aNM_13376676740
8.603054.3050210.7867
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006557
(v1.0)
Efr3aNM_13376676740
8.397429.787498.85912
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006557
(v1.0)
Efr3aFR068108,FR143270,FR273434,NM_13376676740
103.20779.2168
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006557
(v1.0)
Efr3aNM_13376676740
8.608054.246059.71638
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006557
(v1.0)
Efr3aNM_13376676740
8.821658.987787.73785
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006557
(v1.0)
Efr3aFR068108,FR143270,FR273434,NM_13376676740
211.774156.538
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006557
(v1.0)
Efr3aNM_13376676740
4.8292315.0989
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006557
(v1.0)
Efr3aNM_13376676740
4.70446.72104
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006557
(v1.0)
333C0101D04-3Mm.29805C920006C10Rik76740
U016301NAP093917-001C920006C10Rik;TC813940Q922I2U,F,23.27383.23852.88312.68262.222.61312.8428
0006557
(v1.0)
3325C0638H12-3Mm.29805C920006C10Rik76740
U016301NAP093917-001C920006C10Rik;TC813940Q922I2U,F,23.233.11833.01693.07562.97132.9923.0904
0006557
(v1.0)
19587L0283D03-3Mm.29805C920006C10Rik76740
U016301NAP093917-001C920006C10Rik;TC876998,TC813940Q922I2U,F,22.48282.3072.62672.07282.07062.20792.3144
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006557
(v1.0)
1416131_s_atMm.260647Efr3aNM_133766.376740
75.55137.825115.5532.85227.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006557
(v1.0)
A_51_P464973C920006C10RikNM_13376676740
11P0.5420.168P
0006557
(v1.0)
A_52_P671329C920006C10RikNM_13376676740
11P0.6750.309P
Proteome N/A