DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006772
GeneEp400
SynonymsmDomino
p400
Desc.E1A binding protein p400
LocusNM_029337 chr5:111093392-111199736(-)
NM_173066 chr5:111093392-111199736(-)
DB links


Entrez 75560
MGI 1276124
Ensembl ENSMUSG00000029505
Vega OTTMUSG00000017135
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006699
(v2.0)
Ep400NM_029337,NM_17306675560
10.307724.366322.382413.017810.69517.421237.1142924.57019.839986.70507
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006772
(v1.0)
Ep40075560
Maternal RNA0.98293
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006699
(v2.0)
Ep40075560
724/3910.3752490/3910.2089268/3913.0174617/3911.98258/391-3.398691/391-2.6824
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006699
(v2.0)
Ep40075560
372/1310.9875236/1310.7287253/1314.4285563/1313.412/131-3.435855/131-1.8232
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006699
(v2.0)
Ep40075560
69.827719435.99
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006699
(v2.0)
Ep40075560
11.75241318.97
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006772
(v1.0)
Ep400NM_029337,NM_17306675560
25.347315.49229.683017.415884.79923
SOLiD_NMNR_Oo-4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006772
(v1.0)
Ep400NM_029337,NM_17306675560
26.50293.7696216.9024
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006772
(v1.0)
Ep400NM_029337,NM_17306675560
25.869515.336718.1298
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006772
(v1.0)
Ep400NM_029337,NM_17306675560
293.173140.039
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006772
(v1.0)
Ep400NM_029337,NM_17306675560
26.51833.7179919.8841
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006772
(v1.0)
Ep400NM_029337,NM_17306675560
8.964967.160336.80647
SOLiD_NMNR_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006772
(v1.0)
Ep400NM_029337,NM_17306675560
33.517319.4319
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006772
(v1.0)
Ep400NM_029337,NM_17306675560
28.113130.76
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006772
(v1.0)
8679H3070A04-3Mm.1710251700020J09Rik75560
U026564NAP007782-001TC921305,TC854634,TC826020,TC826019U,F4.0043.97853.23843.42313.18783.36323.3229
0006772
(v1.0)
16651K0440A09-3Mm.1710251700020J09Rik75560
U026565NAP003686-0021700020J09Rik;TC854634,TC826019Q9DA54U,F3.2863.11632.91192.79382.42182.77252.5464
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006772
(v1.0)
1426860_atMm.270487Ep400NM_029337.2,NM_173066.175560
663.475903.325434.375249.575288.725
0006772
(v1.0)
1437020_atMm.270487Ep400NM_029337.2,NM_173066.175560
531.575895.35434.1750297.725
0006772
(v1.0)
1447349_s_atMm.270487Ep400NM_029337.2,NM_173066.175560
2474.952782.2751550.8251064.91407.075
0006772
(v1.0)
1453130_atMm.270487Ep400NM_029337.2,NM_173066.175560
00313.27500
0006772
(v1.0)
1440751_atMm.270487Ep400NM_029337.2,NM_173066.175560
00171.100
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006772
(v1.0)
A_51_P380165Ep400NM_02933775560
11P0.780.244P
0006772
(v1.0)
A_52_P475229Ep400NM_02933775560
11P0.3310.0573P
Proteome N/A