DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006864
GeneErn1
SynonymsIre1a
Ire1alpha
Ire1p
Desc.endoplasmic reticulum (ER) to nucleus signalling 1
LocusNM_023913 chr11:106258934-106349110(-)
DB links


Entrez 78943
MGI 1930134
Ensembl ENSMUSG00000020715
Vega OTTMUSG00000003414
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   2 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
      Alzheimer's disease (mmu05010)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006795
(v2.0)
Ern1NM_02391378943
15.7799278.83286.756834.069125.31871.125095.16528104.16129.13450.495625
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006864
(v1.0)
Ern178943
Maternal RNA0.993
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006795
(v2.0)
Ern178943
648/3660.3106411/3660.051105/3661.7662299/3661.0345248/3661.48581070/3660.9464
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006795
(v2.0)
Ern178943
359/1450.7909206/1450.388102/1452.9917264/1452.1764112/1451.6572536/1451.281
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006795
(v2.0)
Ern178943
65.801912453.07
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006795
(v2.0)
Ern178943
9.08726314.42
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006864
(v1.0)
Ern1NM_02391378943
289.97660.062525.331717.57023.60777
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006864
(v1.0)
Ern1NM_02391378943
1044.79207.45989.878951.502611.7632
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006864
(v1.0)
Ern1NM_02391378943
303.1975.7708665.5295
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006864
(v1.0)
Ern1NM_02391378943
295.9559.459477.3096
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006864
(v1.0)
Ern1NM_02391378943
339.442398.614
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006864
(v1.0)
Ern1NM_02391378943
303.3735.6918284.7905
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006864
(v1.0)
Ern1NM_02391378943
23.453216.964720.3303
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006864
(v1.0)
Ern1NM_02391378943
65.526459.7433
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006864
(v1.0)
Ern1NM_02391378943
213.0723.49712
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006864
(v1.0)
Ern1NM_02391378943
14.760710.9517
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006864
(v1.0)
7752H3053D12-3Mm.11168Ern178943
NAP032362-1TC815711Q9EQY03.40393.19452.90922.82413.55963.17563.4962
0006864
(v1.0)
13809J0207B05-3U033544NAP002248-002Ern1;TC815711Q9EQY0U,F,23.49633.07133.05823.03182.65452.74792.603
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006864
(v1.0)
1437119_atMm.340943Ern1NM_023913.278943
7915.59097.651136.725879464.575
0006864
(v1.0)
1438583_atMm.340943Ern1NM_023913.278943
00108.05134.1116.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006864
(v1.0)
A_51_P516705Ern1NM_02391378943
11P1.4910.156P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0006864
(v1.0)
Ern178943
0900100