DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007238
GeneFam60a
SynonymsPptcs1
Tera
Desc.family with sequence similarity 60, member A
LocusNM_019643 chr6:148869581-148894954(-)
DB links


Entrez 56306
MGI 1929091
Ensembl ENSMUSG00000039985
Vega OTTMUSG00000024045
Featureprotein-coding
GO(BP)
  •   1 Terms
      negative regulation of cell migration (GO:0030336)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007162
(v2.0)
Fam60aNM_01964356306
5.8563552.649977.739952.058132.3829109.64614.066645.709539.4764134.841
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007238
(v1.0)
Fam60a56306
Minor ZGA0.9437
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007162
(v2.0)
Fam60a56306
769/3540.605436/3540.1839193/3542.6848530/3541.90689/3540.0652612/3540.1899
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007162
(v2.0)
Fam60a56306
477/1501.1509204/1500.3255188/1503.8223505/1503.061528/150-0.3525242/1500.0901
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007162
(v2.0)
Fam60a56306
30.968618117.11
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007162
(v2.0)
Fam60a56306
9.9181476.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007238
(v1.0)
Fam60aNM_01964356306
54.710653.683738.801122.524410.1039
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007238
(v1.0)
Fam60aNM_01964356306
0.08890510.02976280.1568120.006613370.0199889
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007238
(v1.0)
Fam60aNM_01964356306
57.20492.1417358.5701
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007238
(v1.0)
Fam60aNM_01964356306
55.837753.144733.9004
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007238
(v1.0)
Fam60aNM_01964356306
0.03022690.0634054
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007238
(v1.0)
Fam60aNM_01964356306
57.23822.1123937.1808
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007238
(v1.0)
Fam60aNM_01964356306
35.923721.748227.225
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007238
(v1.0)
Fam60aNM_01964356306
0.006540430.0433194
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007238
(v1.0)
Fam60aNM_01964356306
30.122561.5268
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007238
(v1.0)
Fam60aNM_01964356306
12.208520.162
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007238
(v1.0)
6387H3024C06-3Tera-pending56306
U028060NAP092976-001TC799111,TC799108P70361U,F,23.59993.57953.4633.39943.38493.4473.4274
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007238
(v1.0)
1448126_atMm.18637Fam60aNM_019643.356306
118.95190.925116.7108.475130.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007238
(v1.0)
A_51_P174653MGI:1929091NM_01964356306
11P0.6290.138P
0007238
(v1.0)
A_52_P16472MGI:1929091NM_01964356306
11P0.5580.108P
Proteome N/A