DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007307
GeneFarsb
SynonymsFarsl
Farslb
Frsb
PheRS alpha
Desc.phenylalanyl-tRNA synthetase, beta subunit
LocusNM_011811 chr1:78421411-78485421(-)
DB links


Entrez 23874
MGI 1346035
Ensembl ENSMUSG00000026245
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Aminoacyl-tRNA biosynthesis (mmu00970)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007227
(v2.0)
FarsbNM_001278075,NM_011811,NR_102757,NR_10275823874
12.293647.908587.366615.650725.741832.137222.7479108.16624.906639.4121
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007307
(v1.0)
Farsb23874
Minor ZGA0.96935
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007227
(v2.0)
Farsb23874
604/434-0.0359471/4340.0018233/4342.6701626/4341.853754/434-0.9362407/434-0.69
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007227
(v2.0)
Farsb23874
261/184-0.0084218/1840.1278216/1843.7469517/1842.80497/184-2.498145/184-2.5911
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007227
(v2.0)
Farsb23874
56.886410653.67
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007227
(v2.0)
Farsb23874
11.23915819.38
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007307
(v1.0)
FarsbNM_01181123874
49.833361.22711.597417.476116.1777
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007307
(v1.0)
FarsbNM_01181123874
89.439104.63619.657530.15527.1149
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007307
(v1.0)
FarsbNM_01181123874
52.10534.5371866.8
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007307
(v1.0)
FarsbNM_01181123874
50.859960.612278.6447
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007307
(v1.0)
FarsbNM_01181123874
248.832279.314
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007307
(v1.0)
FarsbNM_01181123874
52.13564.4750486.2548
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007307
(v1.0)
FarsbNM_01181123874
10.737316.873816.9842
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007307
(v1.0)
FarsbNM_01181123874
60.8008105.312
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007307
(v1.0)
FarsbNM_01181123874
42.326419.1248
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007307
(v1.0)
FarsbNM_01181123874
68.259346.0267
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007307
(v1.0)
1099C0178B06-3Mm.28922Farsl23874
U021510NAP005056-001Farsl;TC830355,TC830354,TC827168Q9WUA2U,F,23.90174.06113.51063.42363.9033.68383.8565
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007307
(v1.0)
1423708_a_atMm.28922FarsbNM_011811.323874
496.5841.925291.05163.925376.175
0007307
(v1.0)
1435103_x_atMm.28922FarsbNM_011811.323874
1118.81613.6680.475578.975825.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007307
(v1.0)
A_51_P353360FarslbNM_01181123874
11P0.5070.136P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007307
(v1.0)
Farsb23874
010010