DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007375
GeneFbxo38
SynonymsSP329
Desc.F-box protein 38
LocusNM_134136 chr18:62663713-62708397(-)
DB links


Entrez 107035
MGI 2444639
Ensembl ENSMUSG00000042211
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007296
(v2.0)
Fbxo38NM_134136107035
13.00419.153815.34848.6574410.469518.954819.031812.051612.705218.8583
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007375
(v1.0)
Fbxo38107035
Maternal RNA0.97339
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007296
(v2.0)
Fbxo38107035
669/4380.098494/4380.0573153/4382.0536537/4381.619719/438-2.4087105/438-2.6425
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007296
(v2.0)
Fbxo38107035
285/1670.2569206/1670.1856111/1672.9235369/1672.457411/167-1.776539/167-2.6513
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007296
(v2.0)
Fbxo38107035
84.952715554.81
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007296
(v2.0)
Fbxo38107035
21.88158824.87
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007375
(v1.0)
Fbxo38NM_134136107035
19.900610.67526.451697.2856813.2567
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007375
(v1.0)
Fbxo38FR039638,FR117399,FR165655,FR175343,FR369696,NM_134136107035
147.22109.67461.081970.2159135.484
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007375
(v1.0)
Fbxo38NM_134136107035
20.80794.7556911.6469
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007375
(v1.0)
Fbxo38NM_134136107035
20.310510.5688.91764
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007375
(v1.0)
Fbxo38FR039638,FR117399,FR165655,FR175343,FR369696,NM_134136107035
204.019115.469
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007375
(v1.0)
Fbxo38NM_134136107035
20.824.690559.78057
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007375
(v1.0)
Fbxo38NM_134136107035
5.973267.034618.78983
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007375
(v1.0)
Fbxo38FR039638,FR117399,FR165655,FR175343,FR369696,NM_134136107035
141.615130.238
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007375
(v1.0)
Fbxo38NM_134136107035
14.71232.20829
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007375
(v1.0)
Fbxo38NM_134136107035
1.796760.901326
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007375
(v1.0)
8596H3068F12-3AW214031107035
U038484NAP093604-001TC814783U,F,22.79343.06932.95743.1252.62982.8622.7839
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007375
(v1.0)
1452255_atMm.21295Fbxo38NM_134136.3107035
228.45000132.6
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007375
(v1.0)
A_51_P362881Fbxo38NM_134136107035
11P0.8570.371P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007375
(v1.0)
Fbxo38107035
371371