DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007436
GeneFdft1
SynonymsSQS
squalene synthase
Ss
Desc.farnesyl diphosphate farnesyl transferase 1
LocusNM_010191 chr14:63763988-63796630(-)
DB links


Entrez 14137
MGI 102706
Ensembl ENSMUSG00000021273
Featureprotein-coding
GO(BP)
GO(MF)
  •   6 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007357
(v2.0)
Fdft1NM_01019114137
81.6087196.56138.88767.087191.451760.391529.9184158.98488.002772.5661
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007436
(v1.0)
Fdft114137
Maternal RNA0.91018
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007357
(v2.0)
Fdft114137
632/448-0.0164448/448-0.1159169/4482.1645389/4481.123273/448-0.5535545/448-0.3158
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007357
(v2.0)
Fdft114137
284/1580.3313208/1580.2789156/1583.4852360/1582.500614/158-1.376679/158-1.581
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007357
(v2.0)
Fdft114137
73.95413853.59
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007357
(v2.0)
Fdft114137
19.41368223.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007436
(v1.0)
Fdft1NM_01019114137
204.32796.196949.951563.40821.0938
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007436
(v1.0)
Fdft1NM_01019114137
125.49182.553624.601731.795514.4014
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007436
(v1.0)
Fdft1NM_01019114137
213.64329.8451104.953
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007436
(v1.0)
Fdft1NM_01019114137
208.53695.231117.85
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007436
(v1.0)
Fdft1NM_01019114137
83.917265.9867
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007436
(v1.0)
Fdft1NM_01019114137
213.76729.4364129.254
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007436
(v1.0)
Fdft1NM_01019114137
46.247361.22360.8203
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007436
(v1.0)
Fdft1NM_01019114137
31.452132.9406
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007436
(v1.0)
Fdft1NM_01019114137
245.58583.6378
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007436
(v1.0)
Fdft1NM_01019114137
0.9448112.37655
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007436
(v1.0)
8896H3073H11-3Mm.3204Fdft114137
U035665NAP095801-001Fdft1TC793092P53798U,F,23.93613.92694.13594.4473.85163.9413.6733
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007436
(v1.0)
1448130_atMm.474432Fdft1NM_010191.214137
1507.675352.175858.15512.275147.4
0007436
(v1.0)
1438322_x_atMm.474432Fdft1NM_010191.214137
3174.45601.1251963.951122.125284.625
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007436
(v1.0)
A_51_P485946Fdft1NM_01019114137
11P1.0610.681P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007436
(v1.0)
Fdft114137
551651