DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0008623
GeneGm16515
SynonymsF3-2
Gtlf3b
Desc.predicted gene, Gm16515
LocusNM_025294 chr11:60715748-60727294(-)
DB links


Entrez 24083
MGI 1344388
Ensembl ENSMUSG00000018931
Vega OTTMUSG00000005822
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2008530
(v2.0)
Gm16515NM_02529424083
4.8906290.172894.970829.547519.8867.566118.55112148.21221.25327.40002
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0008623
(v1.0)
Gm1651524083
Maternal RNA0.98895
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2008530
(v2.0)
Gm1651524083
743/5130.0215385/513-0.529183/5130.9568272/5130.414241/513-1.5644327/513-1.2452
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2008530
(v2.0)
Gm1651524083
351/2080.241173/208-0.379981/2082.1764250/2081.5856/208-2.863981/208-1.9401
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2008530
(v2.0)
Gm1651524083
77.009712661.12
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2008530
(v2.0)
Gm1651524083
16.98276326.96
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0008623
(v1.0)
Gm16515NM_02529424083
93.751765.791221.985113.76436.01375
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0008623
(v1.0)
Gm16515NM_02529424083
112.72371.485524.74615.87646.99036
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0008623
(v1.0)
Gm16515NM_02529424083
98.0261.7885571.7796
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0008623
(v1.0)
Gm16515NM_02529424083
95.683165.1306109.901
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0008623
(v1.0)
Gm16515NM_02529424083
72.5892125.237
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0008623
(v1.0)
Gm16515NM_02529424083
98.08291.76405120.535
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0008623
(v1.0)
Gm16515NM_02529424083
20.354813.289914.7326
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0008623
(v1.0)
Gm16515NM_02529424083
15.705217.4956
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0008623
(v1.0)
Gm16515NM_02529424083
61.406954.9048
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0008623
(v1.0)
Gm16515NM_02529424083
13.91925.73462
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0008623
(v1.0)
12857H3153F03-3Mm.22780Gtlf3b24083
U032876NAP003071-001Gtlf3b;TC893141Q9DBW3U,F,23.59893.50493.32553.35052.90133.06532.9132
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0008623
(v1.0)
1417477_atMm.22780Gm16515NM_025294.524083
1241.5251086.6418.85262.825241.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0008623
(v1.0)
A_51_P501312Gtlf3bNM_02529424083
11P1.1810.343P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0008623
(v1.0)
Gtlf3b24083
200200