DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009578
GeneGps1
SynonymsCOPS1
Csn1
Desc.G protein pathway suppressor 1
LocusNM_001177874 chr11:120645586-120650416(+)
NM_145370 chr11:120645829-120650416(+)
DB links


Entrez 209318
MGI 2384801
Ensembl ENSMUSG00000025156
Vega OTTMUSG00000004142
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009455
(v2.0)
Gps1NM_001177874,NM_145370209318
83.0765104.785124.9184.16571.6309120.21472.1814166.17373.3845145.724
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009578
(v1.0)
Gps1209318
Maternal RNA0.88662
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009455
(v2.0)
Gps1209318
833/5380.1177415/538-0.4896125/5381.4747293/5380.452844/538-1.5329366/538-1.1518
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009455
(v2.0)
Gps1209318
501/2090.7457218/209-0.0551110/2092.6067273/2091.704712/209-1.9776164/209-0.9428
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009455
(v2.0)
Gps1209318
97.14714268.41
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009455
(v2.0)
Gps1209318
25.48266738.03
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009578
(v1.0)
Gps1NM_001177874,NM_145370209318
108.9386.775262.681449.746951.9561
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009578
(v1.0)
Gps1NM_001177874,NM_145370209318
114.62594.535186.811216.290557.4913
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009578
(v1.0)
Gps1NM_001177874,NM_145370209318
113.89730.382794.6736
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009578
(v1.0)
Gps1NM_001177874,NM_145370209318
111.17485.9039123.352
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009578
(v1.0)
Gps1NM_001177874,NM_145370209318
265.483359.654
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009578
(v1.0)
Gps1NM_001177874,NM_145370209318
113.96329.9666135.288
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009578
(v1.0)
Gps1NM_001177874,NM_145370209318
58.033248.032650.956
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009578
(v1.0)
Gps1NM_001177874,NM_145370209318
16.347212.6531
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009578
(v1.0)
Gps1NM_001177874,NM_145370209318
30.141223.011
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009578
(v1.0)
Gps1NM_001177874,NM_145370209318
108.88782.2243
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009578
(v1.0)
5908H3012C09-3Mm.30195Gps1209318
U013676NAP101556-1TC940948,TC910234,TC881640Q99LD4U,F,24.44424.45773.96844.35923.79983.97264.1948
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009578
(v1.0)
1415699_a_atMm.30195Gps1NM_145370.2,NM_001177874.1209318
1029.8251009.65891.9641.05896.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009578
(v1.0)
A_51_P374453Gps1NM_145370209318
11P1.0950.531P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009578
(v1.0)
Gps1209318
4.51235.5323