DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009676
GeneGse1
Synonyms
Desc.genetic suppressor element 1
LocusNM_198671 chr8:123012766-123105283(+)
NM_001145897 chr8:123059757-123105283(+)
NM_001145896 chr8:123061309-123105283(+)
DB links


Entrez 382034
MGI 1098275
Ensembl ENSMUSG00000031822
Vega OTTMUSG00000031594
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009556
(v2.0)
Gse1NM_001145896,NM_001145897,NM_198671382034
10.232755.198128.74725.222896.191975.632371.825954.18686.761857.08178
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009676
(v1.0)
Gse1382034
Maternal RNA0.94676
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009556
(v2.0)
Gse1382034
1104/4590.7521448/459-0.1508144/4591.901535/4591.547193/459-0.243887/4590.3504
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009556
(v2.0)
Gse1382034
663/1661.4794267/1660.5666123/1663.0784373/1662.481429/166-0.4461373/1660.5658
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009556
(v2.0)
Gse1382034
78.580725231.18
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009556
(v2.0)
Gse1382034
10.73111596.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009676
(v1.0)
Gse1NM_001145896,NM_001145897,NM_198671382034
57.423619.9043.887454.268091.24217
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009676
(v1.0)
Gse1NM_001145896,NM_001145897,NM_198671382034
1475.44382.52455.471167.374812.5522
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009676
(v1.0)
Gse1NM_001145896,NM_001145897,NM_198671382034
60.04163.7421821.7156
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009676
(v1.0)
Gse1NM_001145896,NM_001145897,NM_198671382034
58.606619.704140.1422
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009676
(v1.0)
Gse1NM_001145896,NM_001145897,NM_198671382034
239.64555.198
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009676
(v1.0)
Gse1NM_001145896,NM_001145897,NM_198671382034
60.07653.6909244.0266
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009676
(v1.0)
Gse1NM_001145896,NM_001145897,NM_198671382034
3.599184.121014.71539
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009676
(v1.0)
Gse1NM_001145896,NM_001145897,NM_198671382034
63.959268.4759
Illumina_Oo-2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009676
(v1.0)
Gse1NM_001145896,NM_001145897,NM_198671382034
2.007533.05616
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009676
(v1.0)
1429653_atMm.334856Gse1NM_198671.2,NM_001145896.1,NM_001145897.1382034
795.35532.175303.67500
0009676
(v1.0)
1455476_a_atMm.334856Gse1NM_198671.2,NM_001145896.1,NM_001145897.1382034
000111.0750
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009676
(v1.0)
A_52_P489979Gse1NM_198671382034
11P1.6190.135P
Proteome N/A