DBTMEE:0009729
| Gene | Gtf2ird1 |
| Synonyms | Alb-c-myc line 166.8
Alb/c-myc line 166.8
BEN
binding factor for early enhancer
c-myc line 166.8
Cream1
ESTM9
GTF3
MusTRD1
Tg(Alb1-Myc)166.8Sst
WBSCR11 |
| Description | general transcription factor II I repeat domain-containing 1 |
| Locus | NM_001081466 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081470 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081468 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081464 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081469 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_020331 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001244936 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081465 UCSC: chr5:134833531-134932132(-) OLP: chr5:134833531-134932132(-)
NM_001081463 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081467 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
NM_001081462 UCSC: chr5:134833531-134932586(-) OLP: chr5:134833531-134932586(-)
|
| DB links |
Entrez 57080
MGI 1861942
Ensembl ENSMUSG00000023079
|
| Feature | protein-coding |
| GO_BP |
-
 4 Terms
|
| GO_MF |
-
2 Terms
|
| GO_CC |
-
2 Terms
|
| KEGG |
-
1 Terms
|
| Ver2_FPKM |
see DBTMEE:2009608 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0009729
(v1.0) | Gtf2ird1 | NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_020331 | 57080
| 17.455 | 14.6282 | 3.42831 | 4.10522 | 6.47816 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0009729
(v1.0) | Gtf2ird1 | NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_020331 | 57080
| 18.2509 | 0.959759 | 15.9597 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0009729
(v1.0) | Gtf2ird1 | NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_020331 | 57080
| 17.8146 | 14.4813 | 11.5807 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0009729
(v1.0) | Gtf2ird1 | NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_020331 | 57080
| 18.2615 | 0.946614 | 12.7013 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0009729
(v1.0) | Gtf2ird1 | NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_020331 | 57080
| 3.17408 | 3.96375 | 1.71887 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0009729
(v1.0) | Gtf2ird1 | NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_020331 | 57080
| 3.68601 | 0.37716 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0009729
(v1.0) | Gtf2ird1 | NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_020331 | 57080
| 8.37 | 4.69732 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0009729
(v1.0) | 20816 | L0813H02-3 | | Gtf2ird1 | 57080
| | | | TC921408,TC916178,TC877218,TC831930,TC831929 | | U,F | 3.5866 | 3.4326 | 3.0005 | 3.3457 | 3.1952 | 3.4568 | 3.471 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0009729
(v1.0) | 1451899_a_at | Mm.332735 | Gtf2ird1 | NM_001081462.1,NM_001081463.1,NM_020331.2,NM_001081464.1,NM_001081465.1,NM_001081466.1,NM_001081467.1,NM_001081468.1,NM_001081469.1,NM_001081470.1 | 57080
| 513.2 | 297.25 | 0 | 0 | 0 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0009729
(v1.0) | A_51_P381522 | Gtf2ird1 | NM_020331 | 57080
| 1 | 1 | P | 1.087 | 0.555 | P |
0009729
(v1.0) | A_52_P430266 | Gtf2ird1 | NM_020331 | 57080
| 1 | 1 | P | 1.542 | 0.164 | P |
0009729
(v1.0) | A_52_P430267 | Gtf2ird1 | NM_020331 | 57080
| 1 | 1 | P | 1.759 | 0.123 | P |
|
| Proteome |
N/A |
