DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009729
GeneGtf2ird1
SynonymsAlb-c-myc line 166.8
Alb/c-myc line 166.8
BEN
binding factor for early enhancer
c-myc line 166.8
Cream1
ESTM9
GTF3
MusTRD1
Tg(Alb1-Myc)166.8Sst
WBSCR11
Desc.general transcription factor II I repeat domain-containing 1
LocusNM_001081466 chr5:134833531-134932586(-)
NM_001081470 chr5:134833531-134932586(-)
NM_001081468 chr5:134833531-134932586(-)
NM_001081464 chr5:134833531-134932586(-)
NM_001081469 chr5:134833531-134932586(-)
NM_020331 chr5:134833531-134932586(-)
NM_001244936 chr5:134833531-134932586(-)
NM_001081465 chr5:134833531-134932132(-)
NM_001081463 chr5:134833531-134932586(-)
NM_001081467 chr5:134833531-134932586(-)
NM_001081462 chr5:134833531-134932586(-)
DB links


Entrez 57080
MGI 1861942
Ensembl ENSMUSG00000023079
Featureprotein-coding
GO(BP)
GO(MF)
  •   2 Terms
GO(CC)
KEGG
  •   1 Terms
      Basal transcription factors (mmu03022)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009608
(v2.0)
Gtf2ird1NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_001244936,NM_02033157080
2.5319616.28220.51154.362755.660882.358218.8148914.7652.441612.69337
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009729
(v1.0)
Gtf2ird157080
Minor ZGA0.96986
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009608
(v2.0)
Gtf2ird157080
682/483-0.015422/483-0.310364/4830.6718240/4830.3208170/4830.54741237/4830.7562
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009608
(v2.0)
Gtf2ird157080
304/1940.1345156/194-0.428159/1941.8205183/1941.236388/1940.903597/1941.0186
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009608
(v2.0)
Gtf2ird157080
81.014713759.13
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009608
(v2.0)
Gtf2ird157080
26.23247933.21
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009729
(v1.0)
Gtf2ird1NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_02033157080
17.45514.62823.428314.105226.47816
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009729
(v1.0)
Gtf2ird1NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_02033157080
263.369167.2287.4812870.118638.4514
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009729
(v1.0)
Gtf2ird1NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_02033157080
18.25090.95975915.9597
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009729
(v1.0)
Gtf2ird1NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_02033157080
17.814614.481311.5807
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009729
(v1.0)
Gtf2ird1NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_02033157080
205.621659.985
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009729
(v1.0)
Gtf2ird1NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_02033157080
18.26150.94661412.7013
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009729
(v1.0)
Gtf2ird1NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_02033157080
3.174083.963751.71887
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009729
(v1.0)
Gtf2ird1NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_02033157080
19.81495.53578
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009729
(v1.0)
Gtf2ird1NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_02033157080
3.686010.37716
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009729
(v1.0)
Gtf2ird1NM_001081462,NM_001081463,NM_001081464,NM_001081465,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_02033157080
8.374.69732
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009729
(v1.0)
20816L0813H02-3Gtf2ird157080
TC921408,TC916178,TC877218,TC831930,TC831929U,F3.58663.43263.00053.34573.19523.45683.471
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009729
(v1.0)
1451899_a_atMm.332735Gtf2ird1NM_001081462.1,NM_001081463.1,NM_020331.2,NM_001081464.1,NM_001081465.1,NM_001081466.1,NM_001081467.1,NM_001081468.1,NM_001081469.1,NM_001081470.157080
513.2297.25000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009729
(v1.0)
A_51_P381522Gtf2ird1NM_02033157080
11P1.0870.555P
0009729
(v1.0)
A_52_P430266Gtf2ird1NM_02033157080
11P1.5420.164P
0009729
(v1.0)
A_52_P430267Gtf2ird1NM_02033157080
11P1.7590.123P
Proteome N/A