DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009843
GeneH2afv
Synonyms
Desc.H2A histone family, member V
LocusNM_029938 chr11:6327229-6344446(-)
DB links


Entrez 77605
MGI 1924855
Ensembl ENSMUSG00000041126
Vega OTTMUSG00000005109
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Systemic lupus erythematosus (mmu05322)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009722
(v2.0)
H2afvNM_02993877605
20.943912.14546.1884142.028241.160774.33636.4936.516840.731186.1515
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009843
(v1.0)
H2afv77605
Major ZGA0.99457
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009722
(v2.0)
H2afv77605
487/2850.2593416/2850.428199/2852.03434/2851.928746/285-0.5634338/285-0.3519
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009722
(v2.0)
H2afv77605
274/1320.5374227/1320.661997/1323.0445409/1322.93918/132-1.861579/132-1.3234
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009722
(v2.0)
H2afv77605
58.83613643.26
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009722
(v2.0)
H2afv77605
15.82479017.58
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009843
(v1.0)
H2afvNM_02993877605
12.6264.2744331.287328.67525.7845
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009843
(v1.0)
H2afvNM_02993877605
28.4877.7252865.330559.382655.8445
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009843
(v1.0)
H2afvNM_02993877605
13.20177.65944.6635
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009843
(v1.0)
H2afvNM_02993877605
12.88614.231514.8458
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009843
(v1.0)
H2afvNM_02993877605
22.335829.1014
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009843
(v1.0)
H2afvNM_02993877605
13.20937.55455.31471
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009843
(v1.0)
H2afvNM_02993877605
28.967227.686828.2986
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009843
(v1.0)
H2afvNM_02993877605
61.902867.5676
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009843
(v1.0)
H2afvNM_02993877605
2.0071832.7916
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009843
(v1.0)
H2afvNM_02993877605
11.1013.5422
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009843
(v1.0)
1428029_a_atMm.27624H2afvNM_029938.177605
356.05123.151126.2908.4788.225
0009843
(v1.0)
1436596_atMm.27624H2afvNM_029938.177605
00303.22500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009843
(v1.0)
A_51_P472630H2afvAK02126777605
11P0.6770.16P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009843
(v1.0)
H2afv77605
021032