DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010178
GeneHnrnpr
SynonymshnRNPR
Hnrpr
Desc.heterogeneous nuclear ribonucleoprotein R
LocusNM_028871 chr4:135866891-135896593(+)
DB links


Entrez 74326
MGI 1891692
Ensembl ENSMUSG00000066037
Vega OTTMUSG00000009867
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010064
(v2.0)
HnrnprNM_001277121,NM_001277122,NM_001277123,NM_02887174326
5.23774.489158.0446126.892725.18638.1159612.76186.3878823.21948.44516
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010178
(v1.0)
Hnrnpr74326
Major ZGA0.99088
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010064
(v2.0)
Hnrnpr74326
765/4270.3277507/4270.1313178/4272.3064509/4271.579140/427-1.3368264/427-1.2882
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010064
(v2.0)
Hnrnpr74326
430/1960.6181259/1960.2846171/1963.326480/1962.608110/196-2.127865/196-2.1658
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010064
(v2.0)
Hnrnpr74326
50.735318926.84
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010064
(v2.0)
Hnrnpr74326
8.08781435.66
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010178
(v1.0)
HnrnprNM_02887174326
14.250116.961762.179553.432725.5642
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010178
(v1.0)
HnrnprNM_02887174326
19.575515.141195.2532102.21129.5992
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010178
(v1.0)
HnrnprNM_02887174326
14.89986.0487218.5056
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010178
(v1.0)
HnrnprNM_02887174326
14.543716.791414.7982
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010178
(v1.0)
HnrnprNM_02887174326
50.352647.1808
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010178
(v1.0)
HnrnprNM_02887174326
14.90855.9658716.2301
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010178
(v1.0)
HnrnprNM_02887174326
57.568551.591449.5514
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010178
(v1.0)
HnrnprNM_02887174326
90.91486.0245
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010178
(v1.0)
HnrnprNM_02887174326
18.377323.2429
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010178
(v1.0)
HnrnprNM_02887174326
14.227720.1662
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010178
(v1.0)
12157H3136E08-32610003J05Rik74326
U004967NAP093016-0012610003J05Rik;TC897696,TC897695Q9CT37U,F4.1944.36394.24034.56353.61483.92363.7654
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010178
(v1.0)
1427129_a_atMm.31051HnrnprNM_028871.174326
217.875423.225738.425752.4600.2
0010178
(v1.0)
1452030_a_atMm.31051HnrnprNM_028871.174326
73.475152.575141156.75151.95
0010178
(v1.0)
1437526_x_atMm.31051HnrnprNM_028871.174326
338.875637.251140.3251042.3696.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010178
(v1.0)
A_51_P339276HnrprNM_02887174326
11P0.6110.129P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010178
(v1.0)
Hnrnpr74326
021021