DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010237
GeneHp1bp3
SynonymsHp1bp74
Desc.heterochromatin protein 1, binding protein 3
LocusNM_010470 chr4:137772542-137799085(+)
NM_001122896 chr4:137772542-137799085(+)
NM_001122897 chr4:137773046-137799085(+)
DB links


Entrez 15441
MGI 109369
Ensembl ENSMUSG00000028759
Vega OTTMUSG00000009979
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010124
(v2.0)
Hp1bp3NM_001122896,NM_001122897,NM_001285478,NM_001285479,NM_001285480,NM_001285481,NM_01047015441
24.521412.320520.08396.470326.064979.3186734.661213.12955.036519.12831
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010237
(v1.0)
Hp1bp315441
Minor ZGA0.98715
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010124
(v2.0)
Hp1bp315441
702/4580.1031420/458-0.2406154/4582.0003281/4580.623736/458-1.585286/458-1.2742
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010124
(v2.0)
Hp1bp315441
348/1690.5266172/169-0.0903144/1693.2801261/1691.942510/169-1.918881/169-1.6422
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010124
(v2.0)
Hp1bp315441
67.777919834.23
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010124
(v2.0)
Hp1bp315441
14.13614110.03
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010237
(v1.0)
Hp1bp3NM_001122896,NM_001122897,NM_01047015441
19.281521.17337.089196.2484536.0716
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010237
(v1.0)
Hp1bp3NM_001122896,NM_001122897,NM_01047015441
24.448924.24739.136710.519350.0473
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010237
(v1.0)
Hp1bp3NM_001122896,NM_001122897,NM_01047015441
20.160613.35923.1005
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010237
(v1.0)
Hp1bp3NM_001122896,NM_001122897,NM_01047015441
19.678820.960714.4239
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010237
(v1.0)
Hp1bp3NM_001122896,NM_001122897,NM_01047015441
98.363594.9654
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010237
(v1.0)
Hp1bp3NM_001122896,NM_001122897,NM_01047015441
20.172313.176115.8196
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010237
(v1.0)
Hp1bp3NM_001122896,NM_001122897,NM_01047015441
6.563486.033135.13962
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010237
(v1.0)
Hp1bp3NM_001122896,NM_001122897,NM_01047015441
41.964247.3071
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010237
(v1.0)
Hp1bp3NM_001122896,NM_001122897,NM_01047015441
8.238632.47683
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010237
(v1.0)
Hp1bp3NM_001122896,NM_001122897,NM_01047015441
11.151111.1171
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010237
(v1.0)
761C0140D09-3Mm.29822230862
U004994NAP001568-002Hp1bp3;TC868723,TC868722,TC868721,TC868720Q61688U,F2.63612.83922.85772.78292.53842.68542.641
0010237
(v1.0)
11939H3128C12-3Mm.29822Hp1bp315441
U004994NAP001568-002TC868721,TC868720,TC868719Q61688U,F3.77533.733.63873.66013.74453.69723.7122
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010237
(v1.0)
1415751_atMm.399941Hp1bp3NM_001122897.1,NM_010470.2,NM_001122896.115441
214.625367.675197.025182.475147.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010237
(v1.0)
A_51_P406414Hp1bp3NM_01047015441
11P0.6120.153P
Proteome N/A