DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010345
GeneHtatsf1
SynonymsTAT-SF1
Desc.HIV TAT specific factor 1
LocusNM_028242 chrX:54306747-54320359(+)
NM_029371 chrX:54307011-54320359(+)
DB links


Entrez 72459
MGI 1919709
Ensembl ENSMUSG00000067873
Vega OTTMUSG00000017792
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010232
(v2.0)
Htatsf1NM_028242,NM_02937172459
14.4575.310810.811129.83923.374129.087914.64566.4473828.572130.3156
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010345
(v1.0)
Htatsf172459
Major ZGA0.96821
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010232
(v2.0)
Htatsf172459
357/1480.7535225/1480.4853173/1483.7209494/1483.048840/1480.1659167/148-0.4218
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010232
(v2.0)
Htatsf172459
199/671.0467101/670.4699172/674.7295475/674.10684/67-1.773426/67-1.9047
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010232
(v2.0)
Htatsf172459
67.003310265.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010232
(v2.0)
Htatsf172459
20.5155437.99
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010345
(v1.0)
Htatsf1NM_028242,NM_02937172459
5.523587.5184722.191716.221110.2563
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010345
(v1.0)
Htatsf1NM_028242,NM_02937172459
71.227140.4672198.923149.342107.21
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010345
(v1.0)
Htatsf1NM_028242,NM_02937172459
5.775415.284688.20281
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010345
(v1.0)
Htatsf1NM_028242,NM_02937172459
5.637387.442974.75889
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010345
(v1.0)
Htatsf1NM_028242,NM_02937172459
24.594926.0784
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010345
(v1.0)
Htatsf1NM_028242,NM_02937172459
5.778775.212315.21939
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010345
(v1.0)
Htatsf1NM_028242,NM_02937172459
20.546115.662119.8526
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010345
(v1.0)
Htatsf1NM_028242,NM_02937172459
89.6886121.746
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010345
(v1.0)
Htatsf1NM_028242,NM_02937172459
7.9017559.5284
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010345
(v1.0)
Htatsf1NM_028242,NM_02937172459
6.748079.58549
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010345
(v1.0)
1013C0173B09-3Mm.21522600017A12Rik72459
U019868NAP005494-0022600017A12Rik;TC904907,TC904905Q9CT41U,F,23.72383.56223.46433.80962.93623.07563.035
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010345
(v1.0)
1454760_atMm.2152Htatsf1NM_028242.2,NM_029371.172459
370.175356.125402.2404.75459.6
0010345
(v1.0)
1431058_atMm.2152Htatsf1NM_028242.2,NM_029371.172459
018.47548.57553.6532.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010345
(v1.0)
A_51_P347452Htatsf1NM_02824272459
11P1.0590.671P
Proteome N/A