DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010483
GeneIft46
SynonymsIFT46
Desc.intraflagellar transport 46
LocusNM_023831 chr9:44581092-44600797(+)
DB links


Entrez 76568
MGI 1923818
Ensembl ENSMUSG00000002031
Vega OTTMUSG00000026615
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010377
(v2.0)
Ift46NM_02383176568
10.81940.537419.99335.610246.9097435.881910.355320.62466.9109747.0251
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010483
(v1.0)
Ift4676568
Maternal RNA0.93212
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010377
(v2.0)
Ift4676568
474/356-0.0995382/356-0.014596/3561.6769266/3560.906116/356-2.347391/356-2.5475
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010377
(v2.0)
Ift4676568
210/159-0.1107159/159-0.115485/1592.6083241/1591.91465/159-2.707430/159-2.9433
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010377
(v2.0)
Ift4676568
52.476311744.85
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010377
(v2.0)
Ift4676568
15.31286423.93
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010483
(v1.0)
Ift46NM_02383176568
42.146113.88044.179364.795077.37356
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010483
(v1.0)
Ift46NM_02383176568
1359.49381.273107.177148.283257.554
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010483
(v1.0)
Ift46NM_02383176568
44.06763.9566115.1438
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010483
(v1.0)
Ift46NM_02383176568
43.014313.74115.306
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010483
(v1.0)
Ift46NM_02383176568
344.333376.878
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010483
(v1.0)
Ift46NM_02383176568
44.09323.9024216.7871
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010483
(v1.0)
Ift46NM_02383176568
3.869444.629834.79326
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010483
(v1.0)
Ift46NM_02383176568
121.7797.1125
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010483
(v1.0)
Ift46NM_02383176568
19.55363.04179
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010483
(v1.0)
Ift46NM_02383176568
0.6346320.224047
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010483
(v1.0)
12694H3149H08-3Mm.300061500035H01Rik76568
1500035H01Rik2.06372.13111.98272.13931.90591.9871.9772
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010483
(v1.0)
1417474_atMm.278597Ift46NM_023831.376568
744226.675306.9120.375227.55
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010483
(v1.0)
A_51_P2514331500035H01RikNM_02383176568
11P1.110.486P
0010483
(v1.0)
A_52_P2177961500035H01RikNM_02383176568
11P0.950.821P
Proteome N/A