DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010522
GeneIgsf3
Synonyms
Desc.immunoglobulin superfamily, member 3
LocusNM_207205 chr3:101181048-101266983(+)
DB links


Entrez 78908
MGI 1926158
Ensembl ENSMUSG00000042035
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010418
(v2.0)
Igsf3NM_20720578908
1.1334934.008262.347210.80534.596775.698123.2843290.58085.802983.74746
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010522
(v1.0)
Igsf378908
Minor ZGA1
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010418
(v2.0)
Igsf378908
778/4770.1926465/477-0.1526132/4771.7223501/4771.3974401/4771.79852136/4771.5615
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010418
(v2.0)
Igsf378908
398/1890.5591255/1890.3144120/1892.8679462/1892.6048250/1892.43571175/1892.0311
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010418
(v2.0)
Igsf378908
73.690118040.94
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010418
(v2.0)
Igsf378908
19.207210917.62
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010522
(v1.0)
Igsf3NM_20720578908
35.361143.21678.044483.180962.30135
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010522
(v1.0)
Igsf3FR081303,NM_20720578908
90.311191.242219.54986.564994.82329
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010522
(v1.0)
Igsf3NM_20720578908
36.97320.41452847.1503
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010522
(v1.0)
Igsf3NM_20720578908
36.089642.782767.0858
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010522
(v1.0)
Igsf3FR081303,NM_20720578908
92.6519137.423
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010522
(v1.0)
Igsf3NM_20720578908
36.99470.40885173.5775
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010522
(v1.0)
Igsf3NM_20720578908
7.447943.071344.04421
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010522
(v1.0)
Igsf3NM_20720578908
3.627754.82323
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010522
(v1.0)
Igsf3NM_20720578908
34.15485.8799
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010522
(v1.0)
Igsf3NM_20720578908
9.1222120.7069
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010522
(v1.0)
12634H3149A05-3Mm.897064833439O17Rik78908
U003641NAP092398-001U,F,23.23773.14973.03013.03893.28423.13853.234
0010522
(v1.0)
15961K0313H07-3Mm.897064833439O17Rik78908
U003641NAP092398-001TC806541U,F,23.31913.2963.52593.40113.32983.40863.2974
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010522
(v1.0)
1431322_atMm.485815Igsf3NM_207205.278908
12251670.45617.25492.3505.95
0010522
(v1.0)
1455048_atMm.485815Igsf3NM_207205.278908
825.8774.975493.4750447.125
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010522
(v1.0)
A_51_P231482Igsf3AK01952478908
11P0.6910.186P
0010522
(v1.0)
A_51_P327632Igsf3NM_20720578908
11P0.5260.0982P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010522
(v1.0)
Igsf378908
12021403