DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010791
GeneItch
SynonymsAIP4
Desc.itchy, E3 ubiquitin protein ligase
LocusNM_008395 chr2:154959217-155052591(+)
NM_001243712 chr2:154959217-155052591(+)
DB links


Entrez 16396
MGI 1202301
Ensembl ENSMUSG00000027598
Vega OTTMUSG00000016008
Featureprotein-coding
GO(BP)
  •   19 Terms
      protein polyubiquitination (GO:0000209)
      positive regulation of T cell anergy (GO:0002669)
      cellular protein modification process (GO:0006464)
      ubiquitin-dependent protein catabolic process (GO:0006511)
      apoptotic process (GO:0006915)
      protein ubiquitination (GO:0016567)
      negative regulation of NF-kappaB transcription factor activity (GO:0032088)
      protein K29-linked ubiquitination (GO:0035519)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
      negative regulation of apoptotic process (GO:0043066)
      innate immune response (GO:0045087)
      positive regulation of protein catabolic process (GO:0045732)
      negative regulation of JNK cascade (GO:0046329)
      negative regulation of alpha-beta T cell proliferation (GO:0046642)
      negative regulation of defense response to virus (GO:0050687)
      defense response to virus (GO:0051607)
      protein K63-linked ubiquitination (GO:0070534)
      protein K48-linked ubiquitination (GO:0070936)
      regulation of protein deubiquitination (GO:0090085)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010690
(v2.0)
ItchNM_001243712,NM_00839516396
12.42633.095746.1869515.57415.84919.601216.294125.3349915.11278.92596
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010791
(v1.0)
Itch16396
Major ZGA0.97522
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010690
(v2.0)
Itch16396
589/420-0.0249419/420-0.1193139/4201.975347/4201.051451/420-0.9703311/420-1.0292
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010690
(v2.0)
Itch16396
303/1560.4425166/156-0.0264127/1563.2076283/1562.172518/156-1.017778/156-1.5808
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010690
(v2.0)
Itch16396
58.780812347.79
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010690
(v2.0)
Itch16396
12.1487117.11
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010791
(v1.0)
ItchNM_00839516396
3.217944.276311.60411.02054.35837
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010791
(v1.0)
ItchFR020686,FR023593,FR213194,FR312333,NM_008395,NR_03719616396
4.712219.0136730.144630.8149.177
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010791
(v1.0)
ItchNM_00839516396
3.364654.545334.66553
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010791
(v1.0)
ItchNM_00839516396
3.284234.233363.95247
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010791
(v1.0)
ItchFR020686,FR023593,FR213194,FR312333,NM_008395,NR_03719616396
5.027885.38191
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010791
(v1.0)
ItchNM_00839516396
3.36664.483084.33494
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010791
(v1.0)
ItchNM_00839516396
10.743510.640810.4072
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010791
(v1.0)
ItchFR020686,FR023593,FR213194,FR312333,NM_008395,NR_03719616396
47.078720.9191
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010791
(v1.0)
ItchNM_00839516396
4.597215.1625
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010791
(v1.0)
ItchNM_00839516396
1.995875.55015
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010791
(v1.0)
18508L0210G02-3Mm.8975Itch16396
Itch2.73722.59742.51992.32142.74352.66522.7352
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010791
(v1.0)
1415769_atMm.208286ItchNM_008395.216396
97.8108.9141.975161.225164.875
0010791
(v1.0)
1431316_atMm.208286ItchNM_008395.216396
0080.925294.45214.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010791
(v1.0)
A_51_P243503ItchAF03745416396
11P1.3070.227P
Proteome N/A