DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010906
GeneKars
SynonymsD8Ertd698e
D8Wsu108e
LysRS
Desc.lysyl-tRNA synthetase
LocusNM_001130868 chr8:114517340-114535205(-)
NM_053092 chr8:114517340-114535205(-)
DB links


Entrez 85305
MGI 1934754
Ensembl ENSMUSG00000031948
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Aminoacyl-tRNA biosynthesis (mmu00970)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010809
(v2.0)
KarsNM_001130868,NM_001286384,NM_05309285305
34.139438.301871.4058104.855143.48892.895472.236871.3328138.7893.4112
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010906
(v1.0)
Kars85305
MGA0.92657
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010809
(v2.0)
Kars85305
612/3940.1222383/394-0.1566225/3942.7554404/3941.361817/394-2.409583/394-2.8239
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010809
(v2.0)
Kars85305
377/1840.5197188/184-0.0847216/1843.7469392/1842.406512/184-1.797651/184-2.4161
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010809
(v2.0)
Kars85305
76.894817244.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010809
(v2.0)
Kars85305
17.244411115.54
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010906
(v1.0)
KarsNM_001130868,NM_05309285305
40.853250.637580.1861102.21652.9197
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010906
(v1.0)
KarsNM_001130868,NM_05309285305
106.46892.098195.314271.483125.897
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010906
(v1.0)
KarsNM_001130868,NM_05309285305
42.715812.833655.2466
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010906
(v1.0)
KarsNM_001130868,NM_05309285305
41.694850.12954.3452
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010906
(v1.0)
KarsNM_001130868,NM_05309285305
169.65152.541
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010906
(v1.0)
KarsNM_001130868,NM_05309285305
42.740612.657859.6039
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010906
(v1.0)
KarsNM_001130868,NM_05309285305
74.239898.693998.4117
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010906
(v1.0)
KarsNM_001130868,NM_05309285305
290.927312.91
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010906
(v1.0)
KarsNM_001130868,NM_05309285305
71.515727.7583
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010906
(v1.0)
KarsNM_001130868,NM_05309285305
34.0319.9419
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010906
(v1.0)
3618C0834G07-3Mm.196544Kars85305
3.2013.16992.98583.08673.16443.10653.1117
0010906
(v1.0)
3991C0910D04-3Mm.196544Kars85305
3.39173.46553.63143.44233.57173.57173.4813
0010906
(v1.0)
7040H3041A04-3Mm.196544Kars85305
U030275NAP121276-001Kars;TC891991,TC891989,TC891988Q99MN1U,F,23.8363.87693.89164.06673.65023.84823.7725
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010906
(v1.0)
1416068_atMm.196544KarsNM_001130868.1,NM_053092.285305
249.875370.275680.975773.85837.7
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010906
(v1.0)
A_51_P154222KarsNM_05309285305
11P0.6390.152P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010906
(v1.0)
Kars85305
110110