DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010928
GeneKcmf1
Synonymsclone DEBT-91
Pmcf
Desc.potassium channel modulatory factor 1
LocusNM_019715 chr6:72791108-72849973(-)
DB links


Entrez 74287
MGI 1921537
Ensembl ENSMUSG00000055239
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010832
(v2.0)
Kcmf1NM_01971574287
64.7494144.64214.57698.212382.0719.620313.097224.44565.444623.2062
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010928
(v1.0)
Kcmf174287
Minor ZGA0.98825
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010832
(v2.0)
Kcmf174287
684/3810.3306445/3810.1075135/3812.0697290/3810.93329/381-1.6246305/381-0.917
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010832
(v2.0)
Kcmf174287
398/1241.1632216/1240.6801127/1243.5122266/1242.40885/124-2.359189/124-1.065
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010832
(v2.0)
Kcmf174287
42.96213531.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010832
(v2.0)
Kcmf174287
14.562410314.14
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010928
(v1.0)
Kcmf1NM_01971574287
150.333148.12973.143656.97619.37685
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010928
(v1.0)
Kcmf1NM_01971574287
473.885490.867283.955255.34430.2394
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010928
(v1.0)
Kcmf1NM_01971574287
157.18723.6795161.612
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010928
(v1.0)
Kcmf1NM_01971574287
153.43146.642166.132
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010928
(v1.0)
Kcmf1NM_01971574287
1039.31757.11
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010928
(v1.0)
Kcmf1NM_01971574287
157.27823.3552182.208
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010928
(v1.0)
Kcmf1NM_01971574287
67.719655.012745.2194
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010928
(v1.0)
Kcmf1NM_01971574287
252.579235.35
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010928
(v1.0)
Kcmf1NM_01971574287
240.06143.289
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010928
(v1.0)
Kcmf1NM_01971574287
73.770768.0822
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010928
(v1.0)
10708H3102E01-3Mm.291941700094M07Rik74287
U027482NAP094964-0011700094M07Rik;TC864102Q9WUM2U,F,24.09074.13473.63844.01813.87384.0273.9684
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010928
(v1.0)
1418694_atMm.29194Kcmf1NM_019715.274287
255.8451.925542.75143.025128.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010928
(v1.0)
A_51_P108948Kcmf1NM_01971574287
11P1.9860.0919P
0010928
(v1.0)
A_52_P370402Kcmf1NM_01971574287
11P0.1790.0369P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010928
(v1.0)
Kcmf174287
111122