DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011035
GeneKctd18
Synonyms
Desc.potassium channel tetramerisation domain containing 18
LocusNR_027630 chr1:58011945-58026368(-)
NM_001159865 chr1:58011945-58026928(-)
NM_001159864 chr1:58011945-58026928(-)
DB links


Entrez 51960
MGI 3603813
Ensembl ENSMUSG00000054770
Vega OTTMUSG00000035129
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010941
(v2.0)
Kctd18NM_001159864,NM_001159865,NR_02763051960
2.190866.758436.6771630.596823.64889.867574.059396.7280519.35068.5929
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011035
(v1.0)
Kctd1851960
Major ZGA0.98936
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010941
(v2.0)
Kctd1851960
612/3930.1259396/393-0.10585/3931.3651188/3930.2659112/3930.2444521/393-0.1921
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010941
(v2.0)
Kctd1851960
323/1660.4452192/1660.093278/1662.428170/1661.352448/1660.2617172/166-0.5441
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010941
(v2.0)
Kctd1851960
59.704611551.92
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010941
(v2.0)
Kctd1851960
21.71457528.95
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011035
(v1.0)
Kctd18NM_001159864,NM_001159865,NM_03021151960
7.013154.5825622.629516.42233.09747
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011035
(v1.0)
Kctd18FR328467,NM_001159864,NM_001159865,NM_030211,NR_02763051960
8.573445.2033225.701319.41533.57097
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011035
(v1.0)
Kctd18NM_001159864,NM_001159865,NM_03021151960
7.33290.8015444.99967
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011035
(v1.0)
Kctd18NM_001159864,NM_001159865,NM_03021151960
7.157634.536554.9122
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011035
(v1.0)
Kctd18NM_001159864,NM_001159865,NM_030211,NR_02763051960
5.283485.66776
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011035
(v1.0)
Kctd18NM_001159864,NM_001159865,NM_03021151960
7.337160.7905665.38754
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011035
(v1.0)
Kctd18NM_001159864,NM_001159865,NM_03021151960
20.951415.856413.2789
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011035
(v1.0)
Kctd18NM_001159864,NM_001159865,NM_030211,NR_02763051960
19.205416.0797
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011035
(v1.0)
Kctd18NM_001159864,NM_001159865,NM_03021151960
9.6997723.4813
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011035
(v1.0)
Kctd18NM_001159864,NM_001159865,NM_03021151960
8.653838.76072
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011035
(v1.0)
13042H3157C07-3Mm.32800D1Ertd8e51960
U021351NAP007936-001Q9CS55U,F,23.61173.61333.4563.6972.97083.25253.1799
0011035
(v1.0)
13250J0008G02-3Mm.32800D1Ertd8e51960
U000300NAP002497-002TC814841Q9CS55U,F,23.17533.14522.84282.89382.78412.98443.0247
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011035
(v1.0)
1428185_atMm.339711Kctd18NM_001159864.1,NM_001159865.151960
326.05534.851276.55779.75678.3
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011035
(v1.0)
Kctd1851960
100100