DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011075
GeneKhdc1b
SynonymsKhdc1
Desc.KH domain containing 1B
LocusNM_001113187 chr1:21373637-21376465(+)
DB links


Entrez 98582
MGI 2138477
Ensembl ENSMUSG00000085079
Vega OTTMUSG00000033753
Featureprotein-coding
GO(BP)
  •   2 Terms
      induction of apoptosis (GO:0006917)
      activation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0006919)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010984
(v2.0)
Khdc1bNM_00111318798582
0.09757181223.362887.111077.56242.8480.02526120.2540042561.96309.4130.0716448
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011075
(v1.0)
Khdc1b98582
Major ZGA0.93859
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010984
(v2.0)
Khdc1b98582
353/273-0.1415272/273-0.1218/273-1.384573/273-0.565374/2730.172574/2730.4713
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010984
(v2.0)
Khdc1b98582
150/106-0.0118102/106-0.173/106-1.283232/106-0.386125/106-0.0253209/1060.377
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010984
(v2.0)
Khdc1b98582
39.99044490.89
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010984
(v2.0)
Khdc1b98582
17.02531894.59
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011075
(v1.0)
Khdc1bNM_00111318798582
1271.351997.07802.618168.2960.167817
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011075
(v1.0)
Khdc1bNM_00111318798582
1454.072263.03943.121199.8450.308913
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011075
(v1.0)
Khdc1bNM_00111318798582
1329.310.0356832178.85
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011075
(v1.0)
Khdc1bNM_00111318798582
1297.541977.021896.1
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011075
(v1.0)
Khdc1bNM_00111318798582
1179.151167
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011075
(v1.0)
Khdc1bNM_00111318798582
1330.080.03519432079.58
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011075
(v1.0)
Khdc1bNM_00111318798582
743.099162.497214.548
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011075
(v1.0)
Khdc1bNM_00111318798582
102.668136.733
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011075
(v1.0)
Khdc1bNM_00111318798582
748.013245.247
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011075
(v1.0)
Khdc1bNM_00111318798582
1326.351322.74
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011075
(v1.0)
1434163_atMm.326336Khdc1bNM_001113187.198582
4682.358398.4256480.225313.2750
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011075
(v1.0)
Khdc1b98582
330350