DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011076
GeneKhdc1c
Synonyms
Desc.KH domain containing 1C
LocusNM_001033904 chr1:21358412-21359824(+)
DB links


Entrez 433278
MGI 3583007
Ensembl ENSMUSG00000041722
Vega OTTMUSG00000033756
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010985
(v2.0)
Khdc1cNM_001033904433278
0162.839529.834299.802243.2810.03512920.0283216170.238158.4370.177944
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011076
(v1.0)
Khdc1c433278
Minor ZGA0.89331
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010985
(v2.0)
Khdc1c433278
192/1210.1521151/1210.20183/121-1.455723/121-1.032322/121-0.3863206/1210.167
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010985
(v2.0)
Khdc1c433278
57/41-0.036650/410.16631/41-1.13058/41-0.94234/41-1.117464/410.0421
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010985
(v2.0)
Khdc1c433278
56.1656389.15
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010985
(v2.0)
Khdc1c433278
12.87381491.96
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011076
(v1.0)
Khdc1cNM_001033904433278
169.246366.162223.32167.8670.021704
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011076
(v1.0)
Khdc1cNM_001033904433278
67.9902143.171106.3598.19460
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011076
(v1.0)
Khdc1cNM_001033904433278
176.9620399.491
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011076
(v1.0)
Khdc1cNM_001033904433278
172.732362.485125.901
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011076
(v1.0)
Khdc1cNM_001033904433278
145.39947.3175
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011076
(v1.0)
Khdc1cNM_001033904433278
177.0650138.084
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011076
(v1.0)
Khdc1cNM_001033904433278
206.76162.083109.725
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011076
(v1.0)
Khdc1cNM_001033904433278
97.141167.9682
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011076
(v1.0)
Khdc1cNM_001033904433278
2.968679.01608
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011076
(v1.0)
Khdc1cNM_001033904433278
0.6527320.589386
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011076
(v1.0)
Khdc1c433278
032053