DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011078
GeneKhdrbs1
Synonymsp62
Sam68
Desc.KH domain containing, RNA binding, signal transduction associated 1
LocusNR_045036 chr4:129380413-129419547(-)
NM_011317 chr4:129391061-129419547(-)
DB links


Entrez 20218
MGI 893579
Ensembl ENSMUSG00000028790
Vega OTTMUSG00000009514
Featureprotein-coding
GO(BP)
  •   6 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010987
(v2.0)
Khdrbs1NM_011317,NR_04503620218
20.35242.643774.9224714.193911.626523.90319.386334.2419710.263824.9477
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011078
(v1.0)
Khdrbs120218
Major ZGA0.98001
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010987
(v2.0)
Khdrbs120218
693/3720.3838482/3720.2569321/3723.3465740/3722.31577/372-3.4974132/372-2.0815
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010987
(v2.0)
Khdrbs120218
454/1950.7035285/1950.4294316/1954.215719/1953.19732/195-3.995172/195-2.0141
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010987
(v2.0)
Khdrbs120218
34.686517320.05
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010987
(v2.0)
Khdrbs120218
9.69971446.74
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011078
(v1.0)
Khdrbs1NM_01131720218
3.543354.6102512.669810.50397.72469
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011078
(v1.0)
Khdrbs1FR162049,NM_01131720218
37.95713.6694272.146341.90698.16045
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011078
(v1.0)
Khdrbs1NM_01131720218
3.70499.510555.02988
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011078
(v1.0)
Khdrbs1NM_01131720218
3.616354.563963.50557
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011078
(v1.0)
Khdrbs1FR162049,NM_01131720218
3.725843.26584
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011078
(v1.0)
Khdrbs1NM_01131720218
3.707059.380293.84479
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011078
(v1.0)
Khdrbs1NM_01131720218
11.730310.14199.65192
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011078
(v1.0)
Khdrbs1FR162049,NM_01131720218
9.609578.91251
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011078
(v1.0)
Khdrbs1NM_01131720218
12.277929.1886
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011078
(v1.0)
Khdrbs1NM_01131720218
6.4138.55534
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011078
(v1.0)
2783C0402A10-3Mm.8256Khdrbs120218
U025568NAP096473-001Khdrbs1;Sam68;TC925012,TC800902Q60735U,F,22.61052.8713.51143.72993.03633.16713.0092
0011078
(v1.0)
12139H3135E09-3Sam6820218
U025568NAP096473-001Khdrbs1;Sam68;TC925012Q60735U,F,23.41753.26683.29963.38553.56383.45193.5864
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011078
(v1.0)
1434541_x_atMm.8256Khdrbs1NM_011317.320218
104.075220.8437.625431.725594.45
0011078
(v1.0)
1437389_x_atMm.8256Khdrbs1NM_011317.320218
036.685.22557.57578.475
0011078
(v1.0)
1418628_atMm.8256Khdrbs1NM_011317.320218
00582.075295.1209.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011078
(v1.0)
A_52_P574697Khdrbs1AK04492720218
11P0.8790.419P
Proteome N/A