DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011869
GeneLsm14b
Synonyms
Desc.LSM14 homolog B (SCD6, S. cerevisiae)
LocusNM_177727 chr2:179759692-179770166(+)
DB links


Entrez 241846
MGI 3040677
Ensembl ENSMUSG00000039108
Vega OTTMUSG00000016234
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011815
(v2.0)
Lsm14bNM_177727241846
19.03721079.37284.046105.8747.99227.70077.04461209.85671.699832.2606
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011869
(v1.0)
Lsm14b241846
Maternal RNA0.99415
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011815
(v2.0)
Lsm14b241846
850/5640.0788448/564-0.4475290/5642.6157786/5641.8055151/5640.15561086/5640.3454
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011815
(v2.0)
Lsm14b241846
415/1780.7053216/1780.1621265/1784.0855675/1783.236229/178-0.5444277/1780.0384
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011815
(v2.0)
Lsm14b241846
97.260217356.22
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011815
(v2.0)
Lsm14b241846
26.90229827.45
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011869
(v1.0)
Lsm14bNM_177727241846
1122.23196.82578.807833.18724.96974
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011869
(v1.0)
Lsm14bFR125794,NM_177727241846
1353.57213.5297.843842.41717.40719
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011869
(v1.0)
Lsm14bNM_177727241846
1173.396.96211214.74
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011869
(v1.0)
Lsm14bNM_177727241846
1145.35194.849155.589
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011869
(v1.0)
Lsm14bFR125794,NM_177727241846
341.306317.44
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011869
(v1.0)
Lsm14bNM_177727241846
1174.076.86676170.645
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011869
(v1.0)
Lsm14bNM_177727241846
72.963832.043650.2674
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011869
(v1.0)
Lsm14bFR125794,NM_177727241846
44.216972.7407
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011869
(v1.0)
Lsm14bNM_177727241846
413.66221.933
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011869
(v1.0)
Lsm14bNM_177727241846
70.5458227.018
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011869
(v1.0)
1455155_atMm.21577Lsm14bNM_177727.4241846
1562.053068.525836.325062.475
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011869
(v1.0)
A_51_P269953BC040823NM_177727241846
11P0.6790.161P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011869
(v1.0)
Lsm14b241846
11127312122