DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011894
GeneLtn1
SynonymsListerin
Rnf160
Zfp294
Desc.listerin E3 ubiquitin protein ligase 1
LocusNM_001081068 chr16:87376896-87432851(-)
DB links


Entrez 78913
MGI 1926163
Ensembl ENSMUSG00000052299
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011841
(v2.0)
Ltn1NM_00108106878913
5.692249.0555211.031213.454818.54794.8113920.72026.5083114.484.43333
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011894
(v1.0)
Ltn178913
MGA0.96257
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011841
(v2.0)
Ltn178913
829/4240.4536631/4240.4565946/4244.71973113/4244.199418/424-2.4363173/424-1.8835
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011841
(v2.0)
Ltn178913
380/1650.6874300/1650.7428718/1655.62221996/1654.90676/165-2.537154/165-2.1796
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011841
(v2.0)
Ltn178913
60.894215040.6
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011841
(v2.0)
Ltn178913
18.63657325.53
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011894
(v1.0)
Ltn1NM_00108106878913
9.410667.6390710.009712.849114.5768
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011894
(v1.0)
Ltn1NM_00108106878913
58.276336.022698.2894112.30481.4473
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011894
(v1.0)
Ltn1NM_00108106878913
9.839712.081718.33439
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011894
(v1.0)
Ltn1NM_00108106878913
9.604537.562374.81366
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011894
(v1.0)
Ltn1NM_00108106878913
44.89511.9706
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011894
(v1.0)
Ltn1NM_00108106878913
9.845432.05325.27946
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011894
(v1.0)
Ltn1NM_00108106878913
9.2674412.40639.99195
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011894
(v1.0)
Ltn1NM_00108106878913
135.032115.043
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011894
(v1.0)
Ltn1NM_00108106878913
5.5922610.0043
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011894
(v1.0)
Ltn1NM_00108106878913
0.7364911.82118
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011894
(v1.0)
A_51_P447855Zfp294BC02779578913
11P0.7950.275P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011894
(v1.0)
Zfp29478913
020020