DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012049
GeneMap1lc3b
SynonymsAtg8
LC3b
Map1lc3
Desc.microtubule-associated protein 1 light chain 3 beta
LocusNM_026160 chr8:124114368-124121947(+)
DB links


Entrez 67443
MGI 1914693
Ensembl ENSMUSG00000031812
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012008
(v2.0)
Map1lc3bNM_02616067443
84.18297.1975410.683177.3517107.387165.58711.548714.934280.6139175.503
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012049
(v1.0)
Map1lc3b67443
MGA0.96164
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012008
(v2.0)
Map1lc3b67443
706/497-0.0064427/497-0.3345239/4972.5161669/4971.754937/497-1.6634252/497-1.5734
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012008
(v2.0)
Map1lc3b67443
338/2130.1527204/213-0.1776184/2133.3178496/2132.536711/213-2.1199109/213-1.5527
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012008
(v2.0)
Map1lc3b67443
45.753715429.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012008
(v2.0)
Map1lc3b67443
16.65757023.8
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012049
(v1.0)
Map1lc3bNM_02616067443
7.482317.4326457.626174.388.03037
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012049
(v1.0)
Map1lc3bNM_02616067443
4.880434.1259818.892921.75314.12155
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012049
(v1.0)
Map1lc3bNM_02616067443
7.8234530.78668.10917
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012049
(v1.0)
Map1lc3bNM_02616067443
7.636467.3580111.0583
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012049
(v1.0)
Map1lc3bNM_02616067443
4.188886.37229
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012049
(v1.0)
Map1lc3bNM_02616067443
7.8279930.364912.1283
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012049
(v1.0)
Map1lc3bNM_02616067443
53.352871.816855.9639
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012049
(v1.0)
Map1lc3bNM_02616067443
21.517113.2728
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012049
(v1.0)
Map1lc3bNM_02616067443
11.3892525.019
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012049
(v1.0)
Map1lc3bNM_02616067443
35.094218.9665
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012049
(v1.0)
9484H3082B10-3Mm.28357Map1lc367443
U009899NAP099165-001Map1lc3;TC852433,TC852432Q9CQV6U,F,23.72953.74783.67744.41924.28884.33884.2634
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012049
(v1.0)
1415928_a_atMm.28357Map1lc3bNM_026160.467443
711.6888.651351.2254030.152404.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012049
(v1.0)
A_51_P126177Map1lc3bNM_02616067443
11P0.5650.11P
0012049
(v1.0)
A_52_P563475Map1lc3bNM_02616067443
11P0.8920.491P
Proteome N/A