DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012408
GeneMical3
SynonymsMICAL-3
Desc.microtubule associated monoxygenase, calponin and LIM domain containing 3
LocusNM_001270475 chr6:120881564-121081040(-)
NM_153396 chr6:120957241-121031645(-)
DB links


Entrez 194401
MGI 2442733
Ensembl ENSMUSG00000003178
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012384
(v2.0)
Mical3NM_001270475,NM_153396194401
62.233613.309112.494436.535962.81874.148283.0876416.052665.79383.37342
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012408
(v1.0)
Mical3194401
MGA0.99996
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012384
(v2.0)
Mical3194401
863/5780.0654500/578-0.32471100/5784.50082571/5783.478835/578-1.9576337/578-1.3737
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012384
(v2.0)
Mical3194401
369/1990.3764220/1990.0284747/1995.42591618/1994.337420/199-1.2164140/199-1.0984
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012384
(v2.0)
Mical3194401
182.851119195.73
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012384
(v2.0)
Mical3194401
69.46317296.48
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012408
(v1.0)
Mical3NM_153396194401
13.85648.6444327.445244.09252.06173
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012408
(v1.0)
Mical3NM_153396194401
86.009845.316976.7292171.3937.97575
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012408
(v1.0)
Mical3NM_153396194401
14.488222.76829.43126
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012408
(v1.0)
Mical3NM_153396194401
14.14198.5576311.9289
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012408
(v1.0)
Mical3NM_153396194401
107.08956.2152
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012408
(v1.0)
Mical3NM_153396194401
14.496622.456413.0832
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012408
(v1.0)
Mical3NM_153396194401
25.409942.573146.0867
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012408
(v1.0)
Mical3NM_153396194401
95.5929107.411
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012408
(v1.0)
Mical3NM_153396194401
8.280516.1399
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012408
(v1.0)
Mical3NM_153396194401
00.381346
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A