DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013108
GeneMmadhc
Synonyms
Desc.methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
LocusNM_133839 chr2:50135401-50152197(-)
DB links


Entrez 109129
MGI 1923786
Ensembl ENSMUSG00000026766
Vega OTTMUSG00000012388
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2013552
(v2.0)
MmadhcNM_133839109129
33.929174.620477.547110.556833.862626.320447.14755.428839.451230.79
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013108
(v1.0)
Mmadhc109129
Maternal RNA0.94901
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013552
(v2.0)
Mmadhc109129
622/3110.4859482/3110.5145134/3112.3419362/3111.5427151/3111.0058614/3110.3809
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2013552
(v2.0)
Mmadhc109129
296/1250.7263233/1250.7774127/1253.5016321/1252.667768/1251.1533223/1250.234
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013552
(v2.0)
Mmadhc109129
45.00318851.14
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2013552
(v2.0)
Mmadhc109129
13.94915624.91
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013108
(v1.0)
MmadhcNM_133839109129
77.526953.69487.8672123.520433.4915
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013108
(v1.0)
MmadhcNM_133839109129
119.89374.131911.140935.722350.8758
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013108
(v1.0)
MmadhcNM_133839109129
81.061512.408258.5822
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013108
(v1.0)
MmadhcNM_133839109129
79.124153.155641.0974
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013108
(v1.0)
MmadhcNM_133839109129
77.28468.1876
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013108
(v1.0)
MmadhcNM_133839109129
81.108612.238345.0742
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013108
(v1.0)
MmadhcNM_133839109129
7.2838122.709927.3392
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013108
(v1.0)
MmadhcNM_133839109129
37.852843.2066
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013108
(v1.0)
MmadhcNM_133839109129
9.478378.87454
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013108
(v1.0)
MmadhcNM_133839109129
78.553361.5585
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013108
(v1.0)
12449H3143G12-3Mm.292142010311D03Rik109129
U022607NAP011667-001AI314967;TC858829Q99LS13.27933.43943.02983.0062.85262.99872.9205
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013108
(v1.0)
1417573_atMm.29214MmadhcNM_133839.2109129
1255.251396.2526.85369.85753.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013108
(v1.0)
A_51_P2367212010311D03RikNM_133839109129
11P0.9420.677P
Proteome N/A