DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013886
GeneNf1
Synonymsneurofibromin
Nf-1
Desc.neurofibromatosis 1
LocusNM_010897 chr11:79153394-79395111(+)
DB links


Entrez 18015
MGI 97306
Ensembl ENSMUSG00000020716
Vega OTTMUSG00000000164
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014341
(v2.0)
Nf1NM_01089718015
3.486128.4420111.96310.67675.115821.5909317.81039.80015.120061.23195
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013886
(v1.0)
Nf118015
Minor ZGA0.95494
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014341
(v2.0)
Nf118015
682/4210.1827444/421-0.0394176/4212.31445/4211.405987/421-0.2147545/421-0.2263
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014341
(v2.0)
Nf118015
333/1690.4633193/1690.0749172/1693.5348400/1692.556517/169-1.2083114/169-1.1568
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014341
(v2.0)
Nf118015
54.25112045.21
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014341
(v2.0)
Nf118015
15.09927919.11
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013886
(v1.0)
Nf1NM_01089718015
8.776058.222767.94133.5384312.2587
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013886
(v1.0)
Nf1NM_01089718015
283.77749.102413.466155.158298.018
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013886
(v1.0)
Nf1NM_01089718015
9.176171.274918.97121
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013886
(v1.0)
Nf1NM_01089718015
8.956858.140197.24249
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013886
(v1.0)
Nf1NM_01089718015
815.055320.376
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013886
(v1.0)
Nf1NM_01089718015
9.18151.257447.94332
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013886
(v1.0)
Nf1NM_01089718015
7.35243.41653.53093
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013886
(v1.0)
Nf1NM_01089718015
106.03695.4819
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013886
(v1.0)
Nf1NM_01089718015
6.871789.7207
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013886
(v1.0)
Nf1NM_01089718015
1.132921.24798
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013886
(v1.0)
16548K0428H05-3Mm.4820Nf118015
U013036NAP004732-001Nf1;TC832204Q046903.77923.85163.84783.69653.46233.6413.4845
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013886
(v1.0)
A_52_P636523Nf1NM_01089718015
11P2.1710.0822P
Proteome N/A