DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0013920
GeneNfyc
Synonyms
Desc.nuclear transcription factor-Y gamma
LocusNM_008692 chr4:120430040-120498320(-)
NM_001048168 chr4:120430040-120504180(-)
DB links


Entrez 18046
MGI 107901
Ensembl ENSMUSG00000032897
Vega OTTMUSG00000008852
Featureprotein-coding
GO(BP)
  •   3 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      positive regulation of transcription, DNA-dependent (GO:0045893)
GO(MF)
  •   4 Terms
GO(CC)
KEGG
  •   1 Terms
      Antigen processing and presentation (mmu04612)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014375
(v2.0)
NfycNM_001048168,NM_001277095,NM_00869218046
12.3586128.688150.74891.877119.93617.248816.8225178.975109.28320.7646
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0013920
(v1.0)
Nfyc18046
Maternal RNA0.96108
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014375
(v2.0)
Nfyc18046
517/396-0.1278398/396-0.108612/396-1.371432/396-2.2628124/3960.3791914/3960.6061
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014375
(v2.0)
Nfyc18046
255/197-0.1398169/197-0.33555/197-1.522313/197-2.501773/1970.615570/1970.9299
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014375
(v2.0)
Nfyc18046
40.851311236.47
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014375
(v2.0)
Nfyc18046
7.2112779.37
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013920
(v1.0)
NfycNM_001048168,NM_00869218046
132.889103.61667.489582.257211.8172
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0013920
(v1.0)
NfycNM_001048168,NM_00869218046
14.74569.648295.761117.946761.58467
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0013920
(v1.0)
NfycNM_001048168,NM_00869218046
138.9484.5662113.048
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0013920
(v1.0)
NfycNM_001048168,NM_00869218046
135.627102.576131.419
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0013920
(v1.0)
NfycNM_001048168,NM_00869218046
9.7976516.3954
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0013920
(v1.0)
NfycNM_001048168,NM_00869218046
139.0284.50366144.136
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0013920
(v1.0)
NfycNM_001048168,NM_00869218046
62.484879.422675.5756
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0013920
(v1.0)
NfycNM_001048168,NM_00869218046
53.326738.7341
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0013920
(v1.0)
NfycNM_001048168,NM_00869218046
14.816224.1019
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0013920
(v1.0)
NfycNM_001048168,NM_00869218046
96.175430.7084
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0013920
(v1.0)
1448963_atMm.435590NfycNM_008692.3,NM_001048168.118046
1894.751429.825933.925914.575594.475
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0013920
(v1.0)
A_52_P606559NfycNM_00869218046
11P1.1060.503P
Proteome N/A