DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014071
GeneNolc1
SynonymsNOPP140
P130
Desc.nucleolar and coiled-body phosphoprotein 1
LocusNM_053086 chr19:46150353-46160020(+)
NM_001039353 chr19:46150353-46160020(+)
NM_001039352 chr19:46150353-46160020(+)
NM_001039351 chr19:46150353-46160020(+)
DB links


Entrez 70769
MGI 1918019
Ensembl ENSMUSG00000015176
Featureprotein-coding
GO(BP)
  •   5 Terms
      nucleolus organization (GO:0007000)
      positive regulation of cell proliferation (GO:0008284)
      box H/ACA snoRNA metabolic process (GO:0033979)
      regulation of protein import into nucleus (GO:0042306)
      positive regulation of transcription, DNA-dependent (GO:0045893)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014527
(v2.0)
Nolc1NM_001039351,NM_001039352,NM_001039353,NM_05308670769
12.869540.172634.8072224.308376.95260.575924.903425.6317332.7573.5753
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014071
(v1.0)
Nolc170769
Major ZGA0.98723
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014527
(v2.0)
Nolc170769
669/4540.0464373/454-0.3987113/4541.5694303/4540.74475/454-4.19772/454-3.2291
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014527
(v2.0)
Nolc170769
271/1690.1675161/169-0.185102/1692.7866293/1692.10882/169-3.793233/169-2.8996
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014527
(v2.0)
Nolc170769
94.113619249.02
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014527
(v2.0)
Nolc170769
25.432711621.92
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014071
(v1.0)
Nolc1NM_001039351,NM_001039352,NM_001039353,NM_05308670769
42.100424.3778168.198263.36117.9601
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014071
(v1.0)
Nolc1NM_001039351,NM_001039352,NM_001039353,NM_05308670769
393.337203.5251665.063042.44170.149
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014071
(v1.0)
Nolc1NM_001039351,NM_001039352,NM_001039353,NM_05308670769
44.01984.7463526.5967
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014071
(v1.0)
Nolc1NM_001039351,NM_001039352,NM_001039353,NM_05308670769
42.967724.13319.1497
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014071
(v1.0)
Nolc1NM_001039351,NM_001039352,NM_001039353,NM_05308670769
476.745513.074
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014071
(v1.0)
Nolc1NM_001039351,NM_001039352,NM_001039353,NM_05308670769
44.04544.6813421.0027
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014071
(v1.0)
Nolc1NM_001039351,NM_001039352,NM_001039353,NM_05308670769
155.725254.286232.718
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014071
(v1.0)
Nolc1NM_001039351,NM_001039352,NM_001039353,NM_05308670769
1727.31725.47
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014071
(v1.0)
Nolc1NM_001039351,NM_001039352,NM_001039353,NM_05308670769
28.19955.9553
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014071
(v1.0)
Nolc1NM_001039351,NM_001039352,NM_001039353,NM_05308670769
14.90297.53373
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014071
(v1.0)
5495H3001E10-3Mm.78861Nolc170769
U019518NAP094836-001Nolc1;TC919359Q99LI4U,F,22.88973.12043.85824.47493.60533.80843.1803
0014071
(v1.0)
10957H3106A07-3Mm.78861Nolc170769
U019518NAP094836-001Nolc1;TC919359Q99LI4U,F,23.23483.14372.91423.36513.16993.0473.1319
0014071
(v1.0)
12723H3151A12-5Nolc170769
U019518NAP031416-1Nolc1;TC927293,TC919360,TC919359,TC919357Q99LI4U,F,22.54382.71432.62322.81222.74652.81612.665
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014071
(v1.0)
1450087_a_atMm.402190Nolc1NM_001039352.1,NM_001039353.1,NM_053086.2,NM_001039351.170769
73.325106.125203.6284.17568.425
0014071
(v1.0)
1428869_atMm.402190Nolc1NM_001039352.1,NM_001039353.1,NM_053086.2,NM_001039351.170769
214.2210.4982.8751999.05491.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014071
(v1.0)
A_52_P463109Nolc1NM_05308670769
11P1.3010.232P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014071
(v1.0)
Nolc170769
110110