DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014080
GeneNop58
SynonymsMSSP
Nol5
SIK similar protein
Desc.NOP58 ribonucleoprotein
LocusNM_018868 chr1:59741850-59768354(+)
DB links


Entrez 55989
MGI 1933184
Ensembl ENSMUSG00000026020
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ribosome biogenesis in eukaryotes (mmu03008)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014536
(v2.0)
Nop58NM_01886855989
9.4484926.518113.9713129.291233.42562.527648.579710.925322566.0878
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014080
(v1.0)
Nop5855989
MGA0.98479
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014536
(v2.0)
Nop5855989
508/2980.2559390/2980.2711162/2982.673479/2982.0069141/2980.9683698/2980.6269
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014536
(v2.0)
Nop5855989
261/1600.192182/1600.0692161/1603.5135437/1602.761656/1600.5317243/1600.0035
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014536
(v2.0)
Nop5855989
26.34288431.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014536
(v2.0)
Nop5855989
12.62487018.04
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014080
(v1.0)
Nop58NM_01886855989
27.54799.6293496.2036161.68734.6024
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014080
(v1.0)
Nop58NM_018868,NR_02852155989
395.437277.508286.006575.368214.424
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014080
(v1.0)
Nop58NM_01886855989
28.80393.4554110.5058
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014080
(v1.0)
Nop58NM_01886855989
28.11549.532658.10426
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014080
(v1.0)
Nop58NM_018868,NR_02852155989
483.059816.446
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014080
(v1.0)
Nop58NM_01886855989
28.82063.408088.88847
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014080
(v1.0)
Nop58NM_01886855989
89.0695156.115155.228
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014080
(v1.0)
Nop58NM_018868,NR_02852155989
569.154500.571
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014080
(v1.0)
Nop58NM_01886855989
53.4257109.905
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014080
(v1.0)
Nop58NM_01886855989
6.729729.7165
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014080
(v1.0)
11584H3119C06-3Mm.10303Nol555989
U000322NAP096607-001Nol5;TC853267O70396U,F,23.35813.33543.56464.11063.71544.06483.7482
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014080
(v1.0)
1450986_atMm.220367Nop58NM_018868.255989
284.325533.675621.51164.8715.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014080
(v1.0)
A_51_P496751Nol5NM_01886855989
11P0.8270.319P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014080
(v1.0)
Nol555989
100100