DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014225
GeneNsmce2
Synonyms
Desc.non-SMC element 2 homolog (MMS21, S. cerevisiae)
LocusNM_001164604 chr15:59205753-59371221(+)
NM_026746 chr15:59205753-59433239(+)
DB links


Entrez 68501
MGI 1915751
Ensembl ENSMUSG00000059586
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014686
(v2.0)
Nsmce2NM_001164604,NM_02674668501
19.94127.43107.92758.682938.577845.838436.767117.6445.915148.043
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014225
(v1.0)
Nsmce268501
Maternal RNA0.95263
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014686
(v2.0)
Nsmce268501
600/461-0.1323407/461-0.2952133/4611.7811271/4610.562315/461-2.803870/461-3.2909
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014686
(v2.0)
Nsmce268501
241/172-0.026179/172-0.0583125/1723.0537248/1721.84418/172-2.233125/172-3.3052
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014686
(v2.0)
Nsmce268501
74.113213455.31
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014686
(v2.0)
Nsmce268501
15.33157321
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014225
(v1.0)
Nsmce2NM_001164604,NM_02674668501
132.40174.54543.673426.706425.7447
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014225
(v1.0)
Nsmce2NM_001164604,NM_02674668501
837.965286.287198.17130.84233.428
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014225
(v1.0)
Nsmce2NM_001164604,NM_02674668501
138.4387.2922681.3302
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014225
(v1.0)
Nsmce2NM_001164604,NM_02674668501
135.12973.796587.1542
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014225
(v1.0)
Nsmce2NM_001164604,NM_02674668501
300.943381.713
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014225
(v1.0)
Nsmce2NM_001164604,NM_02674668501
138.5187.1923895.5878
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014225
(v1.0)
Nsmce2NM_001164604,NM_02674668501
40.434825.786131.8352
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014225
(v1.0)
Nsmce2NM_001164604,NM_02674668501
151.079148.002
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014225
(v1.0)
Nsmce2NM_001164604,NM_02674668501
353.88273.1794
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014225
(v1.0)
Nsmce2NM_001164604,NM_02674668501
160.87779.6028
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014225
(v1.0)
12492H3144E11-3Mm.277621110014D18Rik68501
U016279NAP016575-0011110014D18Rik;TC910342U,F3.57543.64423.13893.03212.97583.17523.2085
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014225
(v1.0)
1424149_atMm.27762Nsmce2NM_001164604.1,NM_026746.368501
1189.05821.2379.025189.275258.325
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014225
(v1.0)
A_51_P3893861110014D18RikNM_02674668501
11P0.4360.0772P
Proteome N/A