DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0014306
GeneNup153
Synonyms
Desc.nucleoporin 153
LocusNM_175749 chr13:46775271-46823218(-)
DB links


Entrez 218210
MGI 2385621
Ensembl ENSMUSG00000021374
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014769
(v2.0)
Nup153NM_175749218210
33.82153.1802101.32539.088562.167920.113829.343687.816852.284217.5456
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0014306
(v1.0)
Nup153218210
1-Cell Transient0.95142
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014769
(v2.0)
Nup153218210
746/3210.7021549/3210.6564769/3214.80983112/3214.597741/321-0.8949238/321-1.0263
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2014769
(v2.0)
Nup153218210
429/1431.0669266/1430.775601/1435.55732143/1435.21239/143-1.821675/143-1.5116
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014769
(v2.0)
Nup153218210
30.402910429.23
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2014769
(v2.0)
Nup153218210
7.647799.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014306
(v1.0)
Nup153NM_175749218210
55.267569.901129.085243.089120.7216
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0014306
(v1.0)
Nup153FR078330,NM_175749218210
141.942141.33474.8094129.35181.4149
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0014306
(v1.0)
Nup153NM_175749218210
57.787212.368776.2637
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0014306
(v1.0)
Nup153NM_175749218210
56.406169.199364.9681
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0014306
(v1.0)
Nup153FR078330,NM_175749218210
729.409503.123
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0014306
(v1.0)
Nup153NM_175749218210
57.820812.199371.2548
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0014306
(v1.0)
Nup153NM_175749218210
26.928341.604236.0137
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0014306
(v1.0)
Nup153FR078330,NM_175749218210
165.324133.163
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0014306
(v1.0)
Nup153NM_175749218210
46.911624.8683
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0014306
(v1.0)
Nup153NM_175749218210
8.6552216.1272
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0014306
(v1.0)
505C0112E07-3Mm.28964Nup153218210
U034737NAP002646-001TC875365U,F,23.6523.61833.04253.67413.35683.38583.3031
0014306
(v1.0)
7913H3056C07-3Mm.28964Nup153218210
U034737NAP002646-001TC875365U,F,22.27752.43482.51592.40282.38032.2892.3239
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0014306
(v1.0)
1452176_atMm.255398Nup153NM_175749.2218210
894.31409857.65860.4506.525
0014306
(v1.0)
1441733_s_atMm.255398Nup153NM_175749.2218210
1065.61986.6751131.575715.375454.675
0014306
(v1.0)
1441689_atMm.255398Nup153NM_175749.2218210
00102.9212.825176.7
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0014306
(v1.0)
A_51_P115085Nup153NM_175749218210
11P0.9350.622P
0014306
(v1.0)
A_51_P115093Nup153NM_175749218210
11P0.5230.158P
0014306
(v1.0)
A_51_P455886Nup153NM_175749218210
11P1.3990.191P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0014306
(v1.0)
Nup153218210
010010