DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015635
GeneOstf1
SynonymsC78236
Sh3d3
SH3P2
Desc.osteoclast stimulating factor 1
LocusNM_017375 chr19:18654854-18706303(-)
DB links


Entrez 20409
MGI 700012
Ensembl ENSMUSG00000024725
Vega OTTMUSG00000028671
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016100
(v2.0)
Ostf1NM_01737520409
74.30520.94715.62256.614749.1387248.029618.742818.51748.63355.5005
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015635
(v1.0)
Ostf120409
Maternal RNA0.97431
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016100
(v2.0)
Ostf120409
590/3970.0586409/397-0.0731128/3971.9359272/3970.781933/397-1.5028300/397-0.9999
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016100
(v2.0)
Ostf120409
347/1940.3246214/1940.0252125/1942.8909253/1941.701513/194-1.7654127/194-1.2009
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016100
(v2.0)
Ostf120409
56.368911648.59
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016100
(v2.0)
Ostf120409
17.50567623.03
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015635
(v1.0)
Ostf1NM_01737520409
21.768210.80544.926546.3608613.2703
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015635
(v1.0)
Ostf1NM_01737520409
202.78579.1754101.3517.559583.9362
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015635
(v1.0)
Ostf1NM_01737520409
22.760627.174111.7889
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015635
(v1.0)
Ostf1NM_01737520409
22.216610.696913.729
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015635
(v1.0)
Ostf1NM_01737520409
512.156905.699
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015635
(v1.0)
Ostf1NM_01737520409
22.773826.801915.0575
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015635
(v1.0)
Ostf1NM_01737520409
4.561216.141665.97978
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015635
(v1.0)
Ostf1NM_01737520409
66.781456.6453
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015635
(v1.0)
Ostf1NM_01737520409
31.64230.992252
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015635
(v1.0)
Ostf1NM_01737520409
11.428614.1525
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015635
(v1.0)
6968H3039E08-3Mm.4165Sh3d320409
U038898NAP003471-001Sh3d3;TC914149Q62422U,F,22.89943.01942.97173.07162.69373.11593.2006
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015635
(v1.0)
1452246_atMm.172222Ostf1NM_017375.320409
190.8585.0561.382.575498.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015635
(v1.0)
A_51_P277345Ostf1NM_01737520409
11P0.1550.0341P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015635
(v1.0)
Ostf120409
233485