DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015735
GenePak1
SynonymsPAK-1
Paka
Desc.p21 protein (Cdc42/Rac)-activated kinase 1
LocusNM_011035 chr7:104991449-105060891(+)
DB links


Entrez 18479
MGI 1339975
Ensembl ENSMUSG00000030774
Vega OTTMUSG00000021135
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016202
(v2.0)
Pak1NM_01103518479
6.4552169.627587.916228.658312.942412.11174.7282875.248812.206113.9115
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015735
(v1.0)
Pak118479
Minor ZGA0.9529
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016202
(v2.0)
Pak118479
536/3560.0773396/3560.037322/356-0.399556/356-1.3217231/3561.42331373/3561.3456
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016202
(v2.0)
Pak118479
244/1670.034145/167-0.317921/1670.575640/167-0.7164112/1671.4587678/1671.4167
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016202
(v2.0)
Pak118479
32.74274966.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016202
(v2.0)
Pak118479
14.50833048.36
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015735
(v1.0)
Pak1NM_01103518479
72.376960.766521.32168.982953.32062
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015735
(v1.0)
Pak1FR146232,NM_01103518479
479.534367.478122.373.054212.6966
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015735
(v1.0)
Pak1NM_01103518479
75.67672.3607466.2976
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015735
(v1.0)
Pak1NM_01103518479
73.86860.156455.7349
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015735
(v1.0)
Pak1FR146232,NM_01103518479
371.863394.529
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015735
(v1.0)
Pak1NM_01103518479
75.72072.328461.1281
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015735
(v1.0)
Pak1NM_01103518479
19.74058.67348.45391
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015735
(v1.0)
Pak1FR146232,NM_01103518479
11.376911.6533
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015735
(v1.0)
Pak1NM_01103518479
63.503238.1722
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015735
(v1.0)
Pak1NM_01103518479
15.090214.8352
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015735
(v1.0)
1420979_atMm.260227Pak1NM_011035.218479
174.850000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015735
(v1.0)
A_51_P385054Pak1NM_01103518479
11P1.0310.867P
0015735
(v1.0)
A_52_P663600Pak1BC07983818479
11P0.2410.089P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015735
(v1.0)
Pak118479
132132