DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015838
GenePcbd2
SynonymsDcoh2
Dcohm
Desc.pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
LocusNM_028281 chr13:55828729-55878191(+)
DB links


Entrez 72562
MGI 1919812
Ensembl ENSMUSG00000021496
Vega OTTMUSG00000033504
Featureprotein-coding
GO(BP)
  •   5 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016309
(v2.0)
Pcbd2NM_02828172562
24.105692.428824.71346.578144.707223.8498313.172715.37394.762616.12662
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015838
(v1.0)
Pcbd272562
Maternal RNA0.98895
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016309
(v2.0)
Pcbd272562
663/4160.1592371/416-0.280684/4161.2685202/4160.287526/416-1.9021194/416-1.6921
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016309
(v2.0)
Pcbd272562
305/1280.7354161/1280.213281/1282.8279177/1281.77897/128-1.988465/128-1.555
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016309
(v2.0)
Pcbd272562
87.846815058.56
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016309
(v2.0)
Pcbd272562
21.58058126.64
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015838
(v1.0)
Pcbd2NM_02828172562
96.030917.14314.902643.275039.24315
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015838
(v1.0)
Pcbd2NM_02828172562
157.52722.529148.638557.517413.2499
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015838
(v1.0)
Pcbd2NM_02828172562
100.4098.8156818.7035
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015838
(v1.0)
Pcbd2NM_02828172562
98.009316.97111.4221
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015838
(v1.0)
Pcbd2NM_02828172562
22.874315.4318
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015838
(v1.0)
Pcbd2NM_02828172562
100.4688.6949412.5274
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015838
(v1.0)
Pcbd2NM_02828172562
4.539083.162173.3435
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015838
(v1.0)
Pcbd2NM_02828172562
56.899741.629
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015838
(v1.0)
Pcbd2NM_02828172562
103.764.47798
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015838
(v1.0)
Pcbd2NM_02828172562
18.282112.4202
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015838
(v1.0)
1452621_atMm.28145Pcbd2NM_028281.172562
773.825340.225119.10278.625
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015838
(v1.0)
A_51_P298843Pcbd2NM_02828172562
11P0.3850.0935P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015838
(v1.0)
Pcbd272562
400400