DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015840
GenePcbp2
SynonymsalphaCP-2
Hnrpx
Desc.poly(rC) binding protein 2
LocusNM_001174073 chr15:102301063-102330490(+)
NM_011042 chr15:102301063-102330490(+)
NM_001103166 chr15:102301063-102330490(+)
NM_001103165 chr15:102301063-102330490(+)
DB links


Entrez 18521
MGI 108202
Ensembl ENSMUSG00000056851
Featureprotein-coding
GO(BP)
  •   4 Terms
      proteasomal ubiquitin-dependent protein catabolic process (GO:0043161)
      innate immune response (GO:0045087)
      negative regulation of defense response to virus (GO:0050687)
      defense response to virus (GO:0051607)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016311
(v2.0)
Pcbp2NM_001103165,NM_001103166,NM_001174073,NM_01104218521
109.28655.85215.421515.298327.572661.573776.539113.052235.85868.3389
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015840
(v1.0)
Pcbp218521
Maternal RNA0.95414
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016311
(v2.0)
Pcbp218521
583/2830.5283406/2830.4032284/2833.55071161/2833.35628/283-2.93863/283-2.7375
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016311
(v2.0)
Pcbp218521
305/981.1172192/980.8475269/984.89481046/984.7123/98-2.616933/98-2.1196
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016311
(v2.0)
Pcbp218521
42.47910739.7
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016311
(v2.0)
Pcbp218521
12.99377417.56
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015840
(v1.0)
Pcbp2NM_001103165,NM_001103166,NM_001174073,NM_01104218521
58.066810.595811.345919.052652.7571
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015840
(v1.0)
Pcbp2FR118117,NM_001103165,NM_001103166,NM_001163643,NM_001174073,NM_01104218521
72.918512.378326.025850.718392.2559
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015840
(v1.0)
Pcbp2NM_001103165,NM_001103166,NM_001174073,NM_01104218521
60.714139.967211.5603
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015840
(v1.0)
Pcbp2NM_001103165,NM_001103166,NM_001174073,NM_01104218521
59.26310.48949.66945
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015840
(v1.0)
Pcbp2FR118117,NM_001103165,NM_001103166,NM_001174073,NM_01104218521
734.305514.803
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015840
(v1.0)
Pcbp2NM_001103165,NM_001103166,NM_001174073,NM_01104218521
60.749439.419810.6051
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015840
(v1.0)
Pcbp2NM_001103165,NM_001103166,NM_001174073,NM_01104218521
10.504618.396124.8503
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015840
(v1.0)
Pcbp2FR118117,NM_001103165,NM_001103166,NM_001174073,NM_01104218521
134.708145.947
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015840
(v1.0)
Pcbp2NM_001103165,NM_001103166,NM_001174073,NM_01104218521
71.113417.2752
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015840
(v1.0)
Pcbp2NM_001103165,NM_001103166,NM_001174073,NM_01104218521
42.552280.7327
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015840
(v1.0)
1421743_a_atMm.236513Pcbp2NM_001103165.1,NM_011042.2,NM_001103166.1,NM_001174073.118521
637.1751146.4402.25334.425471.875
0015840
(v1.0)
1435881_atMm.236513Pcbp2NM_001103165.1,NM_011042.2,NM_001103166.1,NM_001174073.118521
0000172.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015840
(v1.0)
A_52_P18798Pcbp2NM_01104218521
11P1.5330.146P
0015840
(v1.0)
A_52_P635718Pcbp2NM_01104218521
11P0.4020.0767P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015840
(v1.0)
Pcbp218521
3.3362.336.67124.33