DBTMEE:0015840
| Gene | Pcbp2 |
| Synonyms | alphaCP-2
Hnrpx |
| Description | poly(rC) binding protein 2 |
| Locus | NM_001174073 UCSC: chr15:102301063-102330490(+) OLP: chr15:102301063-102330490(+)
NM_011042 UCSC: chr15:102301063-102330490(+) OLP: chr15:102301063-102330490(+)
NM_001103166 UCSC: chr15:102301063-102330490(+) OLP: chr15:102301063-102330490(+)
NM_001103165 UCSC: chr15:102301063-102330490(+) OLP: chr15:102301063-102330490(+)
|
| DB links |
Entrez 18521
MGI 108202
Ensembl ENSMUSG00000056851
|
| Feature | protein-coding |
| GO_BP |
-
 4 Terms
proteasomal ubiquitin-dependent protein catabolic process (GO:0043161)
innate immune response (GO:0045087)
negative regulation of defense response to virus (GO:0050687)
defense response to virus (GO:0051607)
|
| GO_MF |
-
4 Terms
|
| GO_CC |
-
3 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2016311 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0015840
(v1.0) | Pcbp2 | NM_001103165,NM_001103166,NM_001174073,NM_011042 | 18521
| 58.0668 | 10.5958 | 11.3459 | 19.0526 | 52.7571 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0015840
(v1.0) | Pcbp2 | NM_001103165,NM_001103166,NM_001174073,NM_011042 | 18521
| 60.7141 | 39.9672 | 11.5603 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0015840
(v1.0) | Pcbp2 | NM_001103165,NM_001103166,NM_001174073,NM_011042 | 18521
| 59.263 | 10.4894 | 9.66945 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0015840
(v1.0) | Pcbp2 | NM_001103165,NM_001103166,NM_001174073,NM_011042 | 18521
| 60.7494 | 39.4198 | 10.6051 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0015840
(v1.0) | Pcbp2 | NM_001103165,NM_001103166,NM_001174073,NM_011042 | 18521
| 10.5046 | 18.3961 | 24.8503 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0015840
(v1.0) | Pcbp2 | NM_001103165,NM_001103166,NM_001174073,NM_011042 | 18521
| 71.1134 | 17.2752 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0015840
(v1.0) | Pcbp2 | NM_001103165,NM_001103166,NM_001174073,NM_011042 | 18521
| 42.5522 | 80.7327 |
|
| NIA60mer |
N/A |
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0015840
(v1.0) | 1421743_a_at | Mm.236513 | Pcbp2 | NM_001103165.1,NM_011042.2,NM_001103166.1,NM_001174073.1 | 18521
| 637.175 | 1146.4 | 402.25 | 334.425 | 471.875 |
0015840
(v1.0) | 1435881_at | Mm.236513 | Pcbp2 | NM_001103165.1,NM_011042.2,NM_001103166.1,NM_001174073.1 | 18521
| 0 | 0 | 0 | 0 | 172.375 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0015840
(v1.0) | A_52_P18798 | Pcbp2 | NM_011042 | 18521
| 1 | 1 | P | 1.533 | 0.146 | P |
0015840
(v1.0) | A_52_P635718 | Pcbp2 | NM_011042 | 18521
| 1 | 1 | P | 0.402 | 0.0767 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0015840
(v1.0) | Pcbp2 | 18521
| 3.33 | 6 | 2.33 | 6.67 | 12 | 4.33 |
|
