DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015929
GenePcm1
Synonyms
Desc.pericentriolar material 1
LocusNM_023662 chr8:42325113-42419441(+)
DB links


Entrez 18536
MGI 1277958
Ensembl ENSMUSG00000031592
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016400
(v2.0)
Pcm1NM_02366218536
5.524516.492731.58313.88911.383812.352111.536221.01214.02097.49016
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015929
(v1.0)
Pcm118536
Minor ZGA0.91292
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016400
(v2.0)
Pcm118536
598/3090.4385429/3090.3561107/3092.0289305/3091.305530/309-1.2788163/309-1.5134
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016400
(v2.0)
Pcm118536
345/1250.9463215/1250.662102/1253.1881287/1252.506711/125-1.370348/125-1.9468
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016400
(v2.0)
Pcm118536
35.612312628.26
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016400
(v2.0)
Pcm118536
8.628968.99
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015929
(v1.0)
Pcm1NM_02366218536
17.133121.777110.34167.90837.97888
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015929
(v1.0)
Pcm1NM_02366218536
160.506271.356116.641112.3956.4597
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015929
(v1.0)
Pcm1NM_02366218536
17.91432.0203723.7593
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015929
(v1.0)
Pcm1NM_02366218536
17.486121.558415.5217
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015929
(v1.0)
Pcm1NM_02366218536
563.655249.974
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015929
(v1.0)
Pcm1NM_02366218536
17.92471.9926917.0237
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015929
(v1.0)
Pcm1NM_02366218536
9.574747.635789.71228
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015929
(v1.0)
Pcm1NM_02366218536
181.244156.441
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015929
(v1.0)
Pcm1NM_02366218536
55.101352.0825
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015929
(v1.0)
Pcm1NM_02366218536
6.580166.09679
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015929
(v1.0)
2357C0313G12-3Mm.28192Pcm118536
U009290NAP000160-001Frg1;Pcm1;TC855038,TC805155O70287U,F2.88732.7192.61842.56622.5142.42822.5991
0015929
(v1.0)
3867C0904A02-3Mm.217312Pcm118536
U029759NAP034076-1TC8773012.1812.18592.59732.42662.3912.39852.4678
0015929
(v1.0)
14218J0423G08-3Mm.28192Pcm118536
U009290NAP000160-001Frg1;Pcm1;TC805155O70287U,F3.00592.98912.74022.79162.45642.5082.4637
0015929
(v1.0)
17157K0538H09-3Mm.28192Pcm118536
U009290NAP000160-001Frg1;Pcm1;TC855038,TC805155O70287U,F3.143.04972.67012.45692.41252.58212.5852
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015929
(v1.0)
1449120_a_atMm.117896Pcm1NM_023662.318536
18.4522.5750010.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015929
(v1.0)
A_51_P420698Pcm1NM_02366218536
11P1.240.293P
0015929
(v1.0)
A_52_P94055Pcm1NM_02366218536
11P0.4670.0933P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015929
(v1.0)
Pcm118536
210340