DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015933
GenePcna
Synonyms
Desc.proliferating cell nuclear antigen
LocusNM_011045 chr2:132075022-132078916(-)
DB links


Entrez 18538
MGI 97503
Ensembl ENSMUSG00000027342
Vega OTTMUSG00000015547
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016404
(v2.0)
PcnaNM_01104518538
105.17226.754412.383158.196210.657791.335255.966362.713258.882837.894
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015933
(v1.0)
Pcna18538
Minor ZGA0.98336
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016404
(v2.0)
Pcna18538
616/3660.2377504/3660.3445684/3664.45832726/3664.218826/366-1.7193145/366-1.9241
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016404
(v2.0)
Pcna18538
308/1390.6314230/1390.6068536/1395.43021719/1394.93477/139-2.103745/139-2.189
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016404
(v2.0)
Pcna18538
54.669710850.62
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016404
(v2.0)
Pcna18538
23.47237431.72
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015933
(v1.0)
PcnaNM_01104518538
235.617283.888117.692146.101183.158
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015933
(v1.0)
PcnaNM_01104518538
135.868268.607111.85290.54887.3339
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015933
(v1.0)
PcnaNM_01104518538
246.3638.4618309.728
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015933
(v1.0)
PcnaNM_01104518538
240.471281.037268.907
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015933
(v1.0)
PcnaNM_01104518538
287.024347.15
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015933
(v1.0)
PcnaNM_01104518538
246.50337.935294.929
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015933
(v1.0)
PcnaNM_01104518538
108.964141.066178.908
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015933
(v1.0)
PcnaNM_01104518538
93.7276176.852
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015933
(v1.0)
PcnaNM_01104518538
264.712123.272
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015933
(v1.0)
PcnaNM_01104518538
319.662387.083
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015933
(v1.0)
1274C0192C04-3Mm.7141Pcna18538
U023392NAP056562-1Pcna;TC841497P17918U,F,24.19944.16773.7543.8553.53283.76893.7222
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015933
(v1.0)
1417947_atMm.7141PcnaNM_011045.218538
3123.3254904.0752335.051607.1252739.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015933
(v1.0)
A_51_P396351PcnaNM_01104518538
1 (0.915 to 1.148)1P0.708 (0.641 to 0.802)4.53E-06P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015933
(v1.0)
Pcna18538
4106195017