DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0015975
GenePdcl3
Synonyms
Desc.phosducin-like 3
LocusNM_026850 chr1:39044659-39054081(+)
DB links


Entrez 68833
MGI 1916083
Ensembl ENSMUSG00000026078
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016448
(v2.0)
Pdcl3NM_02685068833
18.509275.251529.38227.1274419.959960.338427.987331.040323.536568.3516
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0015975
(v1.0)
Pdcl368833
Maternal RNA0.96769
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016448
(v2.0)
Pdcl368833
706/4420.1625411/442-0.2206114/4421.6196255/4420.535257/442-0.8857444/442-0.5912
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016448
(v2.0)
Pdcl368833
312/1590.4572172/159-0.0028104/1592.8963218/1591.770514/159-1.385591/159-1.3897
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016448
(v2.0)
Pdcl368833
62.923712450.74
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016448
(v2.0)
Pdcl368833
18.77067624.7
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015975
(v1.0)
Pdcl3NM_02685068833
78.210920.33715.3005213.877419.907
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0015975
(v1.0)
Pdcl3NM_02685068833
245.59763.361818.228141.019154.9135
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0015975
(v1.0)
Pdcl3NM_02685068833
81.77666.7690222.1882
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0015975
(v1.0)
Pdcl3NM_02685068833
79.822120.132923.0952
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0015975
(v1.0)
Pdcl3NM_02685068833
20.865125.0009
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0015975
(v1.0)
Pdcl3NM_02685068833
81.82416.6763125.3301
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0015975
(v1.0)
Pdcl3NM_02685068833
4.9074513.399216.2565
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0015975
(v1.0)
Pdcl3NM_02685068833
44.503354.0047
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0015975
(v1.0)
Pdcl3NM_02685068833
49.98776.92151
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0015975
(v1.0)
Pdcl3NM_02685068833
16.851234.3478
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0015975
(v1.0)
11785H3123B02-3Mm.281211110061A19Rik68833
U000187NAP009708-001TC935996Q9D0W33.35263.44313.18943.13222.7793.22093.3392
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0015975
(v1.0)
1424002_atMm.28121Pdcl3NM_026850.468833
1065.225635.325227.775459.7251112.175
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0015975
(v1.0)
A_51_P213352Pdcl3NM_02685068833
11P0.7380.203P
0015975
(v1.0)
A_52_P622442Pdcl3NM_02685068833
11P0.8740.408P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0015975
(v1.0)
Pdcl368833
010010