DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016099
GenePex19
Synonymsperoxisome biogenesis factor 19
Pxf
Desc.peroxisomal biogenesis factor 19
LocusNM_001159525 chr1:174056886-174066628(+)
NM_023041 chr1:174056886-174066628(+)
DB links


Entrez 19298
MGI 1334458
Ensembl ENSMUSG00000003464
Vega OTTMUSG00000029601
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016575
(v2.0)
Pex19NM_001159525,NM_02304119298
21.32129.227358.601849.010349.664324.805119.198761.699939.06825.8763
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016099
(v1.0)
Pex1919298
Minor ZGA0.98917
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016575
(v2.0)
Pex1919298
640/4060.1434415/406-0.084473/4061.1027163/4060.014636/406-1.4128199/406-1.6207
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016575
(v2.0)
Pex1919298
256/1710.0689171/171-0.115562/1712.0616143/1711.062321/171-0.9353112/171-1.1989
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016575
(v2.0)
Pex1919298
91.166815259.98
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016575
(v2.0)
Pex1919298
29.20788733.57
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016099
(v1.0)
Pex19NM_001159525,NM_02304119298
30.378740.617136.493734.420613.5449
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016099
(v1.0)
Pex19NM_001159525,NM_02304119298
45.895159.564360.581361.902326.0826
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016099
(v1.0)
Pex19NM_001159525,NM_02304119298
31.76377.7972744.3141
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016099
(v1.0)
Pex19NM_001159525,NM_02304119298
31.004540.209245.7306
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016099
(v1.0)
Pex19NM_001159525,NM_02304119298
31.78227.6904750.1558
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016099
(v1.0)
Pex19NM_001159525,NM_02304119298
33.787433.234426.978
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016099
(v1.0)
Pex19NM_001159525,NM_02304119298
70.461248.8567
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016099
(v1.0)
Pex19NM_001159525,NM_02304119298
12.18188.88891
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016099
(v1.0)
Pex19NM_001159525,NM_02304119298
1.894611.34415
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016099
(v1.0)
4964G0116F12-3Mm.144235Pxf19298
U001101NAP003612-001Pxf;TC930088Q9QUQ1U,F,23.52143.47093.57513.86363.61363.52833.5263
0016099
(v1.0)
14592J0726D05-3Mm.229109Pxf19298
NAP107857-1TC9037432.49952.6232.77352.70592.322.49932.4378
0016099
(v1.0)
20294L0535H03-3Mm.144235Pxf19298
Pxf2.92992.91763.23773.30553.2313.29363.0887
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016099
(v1.0)
1416425_atMm.247764Pex19NM_023041.3,NM_001159525.119298
00218.675163.8170.725
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016099
(v1.0)
A_51_P427177Pex19NM_02304119298
11P1.1640.407P
0016099
(v1.0)
A_52_P118958Pex19NM_02304119298
11P0.4580.104P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016099
(v1.0)
Pex1919298
10.5010.50