DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016170
GenePhf1
SynonymsD17Ertd455e
mPcl1
PHF2
Tctex-3
Tctex3
Desc.PHD finger protein 1
LocusNM_009343 chr17:27070072-27074835(+)
DB links


Entrez 21652
MGI 98647
Ensembl ENSMUSG00000024193
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016646
(v2.0)
Phf1NM_00934321652
9.94513168.091376.01116.46413.4977.056168.64281480.19821.22148.1012
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016170
(v1.0)
Phf121652
Minor ZGA0.95578
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016646
(v2.0)
Phf121652
761/4570.2224402/457-0.3005720/4574.22111880/4573.364611/457-3.2064106/457-2.6902
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016646
(v2.0)
Phf121652
399/2040.4531213/204-0.0536572/2045.00771343/2044.03353/204-3.643852/204-2.537
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016646
(v2.0)
Phf121652
115.411217665.57
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016646
(v2.0)
Phf121652
34.27069137.66
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016170
(v1.0)
Phf1NM_00934321652
174.825260.94686.72419.318266.08392
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016170
(v1.0)
Phf1NM_00934321652
3039.24362.561420.3262.405100.981
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016170
(v1.0)
Phf1NM_00934321652
182.7963.63704284.698
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016170
(v1.0)
Phf1NM_00934321652
178.427258.326356.113
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016170
(v1.0)
Phf1NM_00934321652
309.018413.63
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016170
(v1.0)
Phf1NM_00934321652
182.9023.58722390.573
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016170
(v1.0)
Phf1NM_00934321652
80.2938.9971514.8234
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016170
(v1.0)
Phf1NM_00934321652
306.189378.216
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016170
(v1.0)
Phf1NM_00934321652
36.588235.259
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016170
(v1.0)
Phf1NM_00934321652
189.36155.862
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016170
(v1.0)
12763H3152A03-3Mm.18643Tctex321652
U017716NAP010247-001Phf1;Tctex3;TC815181,TC815180Q91YR3U,F,23.78143.71063.76883.65613.87513.77673.8347
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016170
(v1.0)
1416542_atMm.480590Phf1NM_009343.221652
235.5337.125233.300
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016170
(v1.0)
A_51_P220260Phf1NM_00934321652
11P0.8880.445P
Proteome N/A