DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016173
GenePhf12
SynonymsPF1
Desc.PHD finger protein 12
LocusNM_174852 chr11:77796318-77844037(+)
DB links


Entrez 268448
MGI 1924057
Ensembl ENSMUSG00000037791
Vega OTTMUSG00000000069
Featureprotein-coding
GO(BP)
  •   4 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      negative regulation of transcription, DNA-dependent (GO:0045892)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016652
(v2.0)
Phf12NM_174852268448
8.3801844.276553.237725.66211.654310.59436.8787980.028912.82829.97855
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016173
(v1.0)
Phf12268448
Maternal RNA0.886
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016652
(v2.0)
Phf12268448
798/4630.272390/463-0.3628211/4632.4368564/4631.610743/463-1.3506285/463-1.2949
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016652
(v2.0)
Phf12268448
460/1810.8293196/181-0.0013195/1813.6223492/1812.7572/181-3.889943/181-2.6309
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016652
(v2.0)
Phf12268448
62.921721928.73
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016652
(v2.0)
Phf12268448
7.00731434.9
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016173
(v1.0)
Phf12NM_174852268448
46.052636.895419.1068.073544.76799
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016173
(v1.0)
Phf12NM_174852268448
317.046152.70482.425539.996720.2634
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016173
(v1.0)
Phf12NM_174852268448
48.15223.0647240.2537
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016173
(v1.0)
Phf12NM_174852268448
47.001336.52559.2956
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016173
(v1.0)
Phf12NM_174852268448
94.6194139.798
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016173
(v1.0)
Phf12NM_174852268448
48.18023.0227465.0334
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016173
(v1.0)
Phf12NM_174852268448
17.68917.795338.92355
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016173
(v1.0)
Phf12NM_174852268448
35.694638.9473
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016173
(v1.0)
Phf12NM_174852268448
39.274436.4006
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016173
(v1.0)
Phf12NM_174852268448
10.7218.18802
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016173
(v1.0)
1434922_atMm.274329Phf12NM_174852.3268448
044.87559.700
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016173
(v1.0)
A_52_P110291Phf12NM_174852268448
11P0.5640.158P
Proteome N/A