DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016185
GenePhf23
Synonyms
Desc.PHD finger protein 23
LocusNM_030064 chr11:69809273-69813513(+)
DB links


Entrez 78246
MGI 1925496
Ensembl ENSMUSG00000018572
Vega OTTMUSG00000006021
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016661
(v2.0)
Phf23NM_001291125,NM_001291126,NM_001291127,NM_03006478246
40.034742.025284.4114114.61148.474844.717833.9393100.92948.865552.8224
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016185
(v1.0)
Phf2378246
Major ZGA0.99881
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016661
(v2.0)
Phf2378246
913/4780.42431/478-0.2649777/4784.26772167/4783.5053/478-4.8556121/478-2.5664
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016661
(v2.0)
Phf2378246
399/1740.6814182/174-0.0511256/1744.0665703/1743.32712/174-3.834352/174-2.3087
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016661
(v2.0)
Phf2378246
84.355125732.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016661
(v2.0)
Phf2378246
17.083711414.99
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016185
(v1.0)
Phf23NM_03006478246
40.413854.420478.471930.742521.9241
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016185
(v1.0)
Phf23NM_03006478246
244.153236.204438.583161.238102.739
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016185
(v1.0)
Phf23NM_03006478246
42.256412.464559.3738
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016185
(v1.0)
Phf23NM_03006478246
41.246453.873971.3111
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016185
(v1.0)
Phf23NM_03006478246
86.804885.6283
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016185
(v1.0)
Phf23NM_03006478246
42.280912.293778.2116
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016185
(v1.0)
Phf23NM_03006478246
72.652729.683131.4234
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016185
(v1.0)
Phf23NM_03006478246
158.402190.306
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016185
(v1.0)
Phf23NM_03006478246
20.57624.8339
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016185
(v1.0)
Phf23NM_03006478246
128.07250.6648
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016185
(v1.0)
6210H3020E04-3Mm.208052410141M05Rik78246
2410141M05Rik3.79413.86983.72464.04613.27793.58093.4626
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016185
(v1.0)
1428997_atMm.413084Phf2378246
416.425555.45995.025397.65343.55
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016185
(v1.0)
A_51_P2075702410141M05RikNM_03006478246
11P1.2560.263P
0016185
(v1.0)
A_52_P3387172410141M05RikNM_03006478246
11P0.980.906P
Proteome N/A