DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016371
GenePla2g4c
SynonymsCPLA2-gamma
Desc.phospholipase A2, group IVC (cytosolic, calcium-independent)
LocusNM_001168504 chr7:13911016-13946017(+)
NM_001004762 chr7:13914671-13946017(+)
DB links


Entrez 232889
MGI 1196403
Ensembl ENSMUSG00000033847
Vega OTTMUSG00000036437
Featureprotein-coding
GO(BP)
  •   1 Terms
      glycerophospholipid catabolic process (GO:0046475)
GO(MF)
  •   1 Terms
      calcium-independent phospholipase A2 activity (GO:0047499)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016853
(v2.0)
Pla2g4cNM_001004762,NM_001168504232889
0.188642465.6091142.0258.867416.77090.2062860.448864832.35829.11410.198716
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016371
(v1.0)
Pla2g4c232889
Minor ZGA0.99667
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016853
(v2.0)
Pla2g4c232889
386/291-0.1049315/291-0.00196/291-1.835431/291-1.86618/291-1.8997140/291-1.6444
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016853
(v2.0)
Pla2g4c232889
152/119-0.1583117/119-0.13943/119-1.433814/119-1.68686/119-2.079338/119-2.2019
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016853
(v2.0)
Pla2g4c232889
37.61293996.44
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016853
(v2.0)
Pla2g4c232889
12.44861395.76
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016371
(v1.0)
Pla2g4cNM_001004762,NM_001168504232889
483.838788.85143.814111.59630.30522
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016371
(v1.0)
Pla2g4cNM_001004762,NM_001168504232889
4338.836535.34363.76899.69815.68563
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016371
(v1.0)
Pla2g4cNM_001004762,NM_001168504232889
505.8970.0690061860.654
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016371
(v1.0)
Pla2g4cNM_001004762,NM_001168504232889
493.805780.93615.957
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016371
(v1.0)
Pla2g4cNM_001004762,NM_001168504232889
6203.76498.44
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016371
(v1.0)
Pla2g4cNM_001004762,NM_001168504232889
506.1910.068061675.561
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016371
(v1.0)
Pla2g4cNM_001004762,NM_001168504232889
40.56511.196720.3936
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016371
(v1.0)
Pla2g4cNM_001004762,NM_001168504232889
70.2078161.595
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016371
(v1.0)
Pla2g4cNM_001004762,NM_001168504232889
157.19135.6832
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016371
(v1.0)
Pla2g4cNM_001004762,NM_001168504232889
61.5344142.926
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016371
(v1.0)
1436712_atMm.223639Pla2g4cNM_001168504.1,NM_001004762.3232889
5451.2758255.6753016.275173.55171.4
0016371
(v1.0)
1444662_atMm.223639Pla2g4cNM_001168504.1,NM_001004762.3232889
665.71240.9630.675304.5217.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016371
(v1.0)
A_52_P17207Pla2g4cBC054740232889
11P0.3780.0655P
0016371
(v1.0)
A_52_P243075Pla2g4cNM_001004762232889
11P0.4120.0741P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016371
(v1.0)
Pla2g4c232889
5964314781061221